Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02343 atggctatcgccggcgaactcttccggcccaatttcaccgaaatgctcgaggaatccccttccggtgcgcctcaacttcacgttcttgccgttgatgacagtctcgttgatcgtaaggtcattgaacgcttgctcaagatttcttcatgcaaagtgacagttgtcgagagtggaacgcgtgctcttcagtatctggggctggacggtgacaacgcttctctcggttttgatagtgttaaggttaatctcataatgacggattattccatgccgggtatgacaggatacgaattactcaagaaaatcaagcaggagtcttctgtgtttagggagattccagtagtgatcatgtcgtcggagaatgttttgacccgaattgataggtgccttgaggaaggagccgaggagtttctgttgaagccagtaaaattgtcagatgtaatacgcttaaaagatttcatcatgaaagggaaagtgaaggaaggtgagaaaatatctcacaaaagaatgcggtcaattgattgcaatccacctctatctgcaacatgctcatcaatgtctcttccatgcgatccatcaccgtcaatactctcaccgttatcttcaaagaaggctagattgtga 624 0.0 MAIAGELFRPNFTEMLEESPSGAPQLHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGLDGDNASLGFDSVKVNLIMTDYSMPGMTGYELLKKIKQESSVFREIPVVIMSSENVLTRIDRCLEEGAEEFLLKPVKLSDVIRLKDFIMKGKVKEGEKISHKRMRSIDCNPPLSATCSSMSLPCDPSPSILSPLSSKKARL 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02343 207 CDD REC_typeA_ARR 28 150 - -
Pste6g02343 207 Pfam Response regulator receiver domain 28 148 IPR001789 GO:0000160
Pste6g02343 207 ProSiteProfiles Response regulatory domain profile. 27 155 IPR001789 GO:0000160
Pste6g02343 207 SMART REC_2 26 151 IPR001789 GO:0000160
Pste6g02343 207 Gene3D - 26 173 - -
Pste6g02343 207 SUPERFAMILY CheY-like 25 156 IPR011006 -
Pste6g02343 207 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 163 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02343 Pste-Chr6 11400841 11403173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02343 5 169 Response Regulator Gene Family AT3G48100 69.643 6.97e-78 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pste6g02343 Response_reg 8.6e-21 CL0304