Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02342 CTCATGGATGGACAAAAGTCAAAGGATATGGATATGTGTGAGAAATATGGGTTTACCTTGCATAAGTATCAGATTTTGAAAAAGTACGATTTCTTGTTTACAACAACTGATGAGGTAGAAGCGAAAAGAGACATGGAGTACTACTACCTCACACTTCTATTACTTACTTTGGCGTTCATCATCATCTCCACCTTTAAAACAGCTAAATCCTCAAAATACCCCCCTGGACCGCGCCCTTTTCCAATCATAGGAAACATCTTGGAGCTTGGAAAACAACCTCACCAAGCACTAACCAAGCTTTCTCAAATTTATGGTCCTATAATGAGTCTTAAGCTTGGTAACACTACCACCATAGTCATTTCTTCTCCACAAGTTGCCCAAGAAGTACTTCACAAAAATGATAAAATCCTAGCTTATAGGACAGTCCCTGATGCTGTTCGAGCACTTGACCATCACCTACACTCAGTTGTATGGACTCCTCCTTTAGCTCAATGGAGGATTCTCAGGAGAGTTTGTGCTACCATAGTGTTCTCTCCTCAGCAGCTTGATTTTACACAAGTTCTTCGTCACATGAAGGTGCAAGAACTGATGGGTTATGTGAAAGAAAGATGCAACAAAGGTGAAGCGCTGGATATAGGAGAGGCTTCATTTACAACTGTGCTTAATTCCATATCGAACACCCTCTTCTCGATGGATTTGGCTCATTACACTTCTGATAAGTCTCAAGAGTTCAAGGATATCATTTGGGGTATCATGGAAGAAGTAGGGAGGCCTAATATCAATGACTTTTTTCCAATCTTTGCCCCGCTTGATCCACAAGGTGTGAAGAGAAGATGTAATAATTATTTTAAAAAGTTATTAGGATTTTTTTATGCTCTCATAGAAGAAAGATTGCATTTAAGGGCATTAGAAAATGAATCCAAGGAATGCAGTGACGTGTTAGATTCTGTGCTAGAACTTATGCTTGAAGGCAGTTCGCAAGTGACCCGCTCTCATGTTTTGCATTTATTTATAGATTTATCTGTGGCTGGTATAGACACAACATCAAGCTCAATAGAATGGGTCATGACTGAGTTGCTACGTAACCCAGAAAAACTAGAAAAGCTTCCATACTTACAAGCAGTAATTAAAGAAACTTTTCGCCTGCATCCACCAGCTCCAATGTTAGTGCCACGCAAGTCCGAAGTTGATGTTGAATTATGTGGCTTCATGATACCAAAAGGTGCCCAAATTCTAGTTAATATATGGGCTATGGGAAGAGATTCGAGTATTTGGAAAAATCTAAATCAATTTACACCTGAAAGGTTCTTAGAAAATGACATTGATTTTAAAGGCCAAGATTTTGAGCTAATACCCTTTGGAGCGGGAAGAAGGATTTGTCCTGGTTTGCCATTGGCTTCCAGAACTATGTATGTTGTGTTAGTCTCTCTTCTATACAATTATGATTGGAAGCTCATGGATGGACAAAAATCAGAAGATATGGACATGTCTGAGAAATATGGGATCACTTTGCATAAGGCTCAGCCTCTCCAAGTCATTCCCATCAAAGCATAA 1554 0.3945 LMDGQKSKDMDMCEKYGFTLHKYQILKKYDFLFTTTDEVEAKRDMEYYYLTLLLLTLAFIIISTFKTAKSSKYPPGPRPFPIIGNILELGKQPHQALTKLSQIYGPIMSLKLGNTTTIVISSPQVAQEVLHKNDKILAYRTVPDAVRALDHHLHSVVWTPPLAQWRILRRVCATIVFSPQQLDFTQVLRHMKVQELMGYVKERCNKGEALDIGEASFTTVLNSISNTLFSMDLAHYTSDKSQEFKDIIWGIMEEVGRPNINDFFPIFAPLDPQGVKRRCNNYFKKLLGFFYALIEERLHLRALENESKECSDVLDSVLELMLEGSSQVTRSHVLHLFIDLSVAGIDTTSSSIEWVMTELLRNPEKLEKLPYLQAVIKETFRLHPPAPMLVPRKSEVDVELCGFMIPKGAQILVNIWAMGRDSSIWKNLNQFTPERFLENDIDFKGQDFELIPFGAGRRICPGLPLASRTMYVVLVSLLYNYDWKLMDGQKSEDMDMSEKYGITLHKAQPLQVIPIKA 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02342 517 Pfam Cytochrome P450 365 506 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02342 517 Pfam Cytochrome P450 74 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02342 517 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 49 516 - -
Pste6g02342 517 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02342 517 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02342 517 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02342 517 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02342 517 CDD CYP76-like 101 514 - -
Pste6g02342 517 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02342 517 PRINTS E-class P450 group I signature 332 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02342 517 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02342 517 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02342 517 PRINTS E-class P450 group I signature 414 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02342 517 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02342 517 SUPERFAMILY Cytochrome P450 69 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pste6g02342 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Pste6g02342 517 Gene3D Cytochrome P450 62 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02342 Pste-Chr6 11400498 11404555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02342 49 516 Cytochrome P450 AT2G45550 47.485 5.39e-169 486