Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02339 GCTTTTTTCACTTGAGTGTATAGTTGTGTGTCCCAAACGGCACAAAGACATGGATGAAACTATGTTGACGAGCGCAGTGAAGGAGAGTAAGATTAAGGCGAATTTTTGTTGCATTTCCCACGAATTCTCCCGAATAGCGTCCGCAAACCCTGACAAAATCGCAGTGATTCACGCTTCCGGCGTTGCCCACCTTTCCAGAGAGTTTCGCCGCGAAAATTCCACCGCCCCCGACTTCAACGCTGACATTACCACGCTCTTGGAAAAGCGCGTCGAATCCACGTCTCCGCCACTGTACCATGGGGACCGTTCCTTCACTTACTCTCACGTCTTGAACGCCGTTGCTTCCCTCAGCTCTCGCCTCCGCTCTATCCTGCTTGGTGCGGATGACCCACACCTGATCACTGCCCAATCTAAAGGTAATGCTGGTGTCAACCGCGAAGAGGGAGCTGTACAGGCACCCGAATCCTTGGAAACTGTCATGCCTAGTGAAGGGGCAATGGCTGAATCATGCGAAGAGTATAGACCAAAGATAGTGGGGATTTATATGCCTCCTTCTGTCGAATATATTGTTGCCGTACTTTCAGTACTGAGGTGCGGGGAAGCCTTCTTGCCTCTGGATCCATTTTGGCCGAATGAAAGGATATTGTCTGTTGTTTCTTCTTCAAATGTTGATCTCATTATAGGGTCCCAATCTTCTTTTGGTAAAAGCAACTTGGACAATCTTGATGAAACACATTGGCTAGTAAAGTCAATTAATTGTCCTGTTTTGAATTATTCCGCTGAAAACCTTCAAGAATGTAGTGGTCCAACAGATTTAGTATGGCCCTGTGCCAATGAAAAACAAAGATCATTCTGCTATCTGATGTACACATCTGGATCAACTGGAAAGCCTAAAGGAGTGTGTGGCACTGAACAAGGTCTTTCAAATCGCTTTTTGTGGATGCAAGGAATGTATCCTCTGAATGGGCAGGAACTATTGTTGTTTAAGTCATCAGTTAGCTTCATTGACCACCTGCAAGAATTTCTCAGTGCTATATTGACTGCTTGCTTGTTAGTAGTTCCTCCTTTCAATGAGCTAAAAGAAAATATATTTTCTATAATAGATTTTCTTCAGGCATATTTTGTTAATAGGCTTGCAGCTGTTCCATCACTAATGAGGACTATTCTTCCTGGATTGCAAACCCATGCTAACATGCGGATTGAAAATTCACTGAAATTGCTTGTGCTTAGTGGTGAAACTTTTCCCTTGACCTTGTGGGAGATGCTTTCAACTACATTACCAAAGACATCAATCTTGAATTTATATGGAAGTACTGAGGTCTCCGGTGACTGTACATATTTTGATTGCAAGAGGATGCCATTGATTTTGAAGGAAGAAATGCTAACGAGTGTTCCAATAGGTTTACCCATTACTAACTGTGATGTGATGCTTTTTAGTGAAACTGGTGCATCAAATGAGGGAGAGCTATATGTTGGTGGCTCTTGCATCTTTAGGGGCTACTATAATAAATCTAATATAATGTTTGACACATTTGCTAAGTTGCCTAATAAGTACAGTTGTAGTGATTCTGTTAATGTTTACGGAGGCCAATTATACTTCACAACTGGCGATTTAATCAAACAGTTGTCAAGTGGTGACTTCGTATTTTTGGGAAGAAAAGACCGCATTATAAAAATCAATGGACAGCGTATTGCCCTAGAAGAAGTTGAAGAATTGCTAAGGGAACATCCGTATGTAAATGATGCTGCTGTGGTTTGTCGAAATAATCAAGCAGAACTTCTGCTTCTTGAAGCTTTTATCATATTAAAGGAAAAGGAAAGATTAGGTGAATTATTAATACCTGCATTCAGAAGTTGGATGATTAACAAACTTCCATCAGTTGTAGTTCCCAACCATTTCTTCTTTATGGAATCATTACCTGTGTCTGCTAGTGGTAAAGTTAATTATGAGTTGTTGGTTGGCTCTGCATTATTAACAAAAAATGTCAAGGATAAAGTTGGGAATGTTGACTGTGGCATTCTTTTGCAATTTATTAAAAAGGCATTCCATGATACTTTAATGGTTGAAAAGGTTTGTAAAGATGATGATTTCTTTACGATGGGCGGTAACTCTCTTTCTGCTGCACATGTTGCTTACAGTTTGGGGATTGACTTGAGATTTCTTTACTTCTATCCAACTCCTTTTAAGCTTTGTATGGCTCTTCTTCAGAAAAAAGGATCATGCCCTTTGCATAACAGGCTGGATAGTTGTTTGCAAATAAATACAGACAGAGAAGATAACCATATTTCTACTAATCATGTTGAAAATTCTAGATCTCTTGAGTCAAGGATGATTTCCAATGATAAAGATGATGATTCTTTTCCTTCTAAACGCTTAAAGAGGGATTTGACAGATGTTACATCAGGGGTTGACGAATCATTCTCATGGTATTCCCCTTCACAGTTATCATTCTCATTAAGCCGGTGCAACAAGGTGTTGCGTAAAGGTCAGCAAGTAGTAATTGATTCACACCAAACAACTAGGTCCGCAAATGTTCCAATAGGCAGTAGAGGCCATATGAACGACTTTTGGAAAGTTTACATGGAATCTTGTGTTGATGCTTCACCAATGCTTGTGTTTAAAGGCACAAACATTTATTTGTTCATTGGATCTCACTCTCATAAATTTTTCTGCATAAATGCTAGAAGTGGTTCTGTACAGTGGGAGACGAAACTAGAAGGACGTATTGAATGTACAGCAGCAGTTGTTTCTGATTTTTCGCAGGTTGTTGTTGGAAGTTACAAGGGAAAAATATATTTTCTTGATTTTTTTAATGGAGACATCTGTTGGATTTTCCAAACTTCTGGCGAGTCCCTCCCTCCCCCAGGGTTAAGTTGTAACTATGTTTTTGAACTAATGAAGGTAAAATCACAGCCAGTTGTAGACACATGCAGACAATTGATCTGGTGTGGCTCACATGATCATAACTTATATGCTCTTGACTACAAAAAACATTGCTGTGTGTACAAGCTACCATGTGGAGGCAGTATATATGGGTCACCTGCTATTGATGAGGTTCGTGGCTTGCTTTACGTGGCCTCTACTGGTGGTCGTATAACAGCTATATCAATATCGGCTTCTCCATTTACTACACTGTGGCTACATGAATTAGAAGTCCCTGTGTTTGGTTCTCTTGCTGTTGCACACAATGGAACTGTAATATGTTGCTTGGTAGATGGACATGTTCTTGCATTTGATCCAAATGGATCCATTGTTTGGAAGAAAACTACTGATGGTCCAATATTTGCTGGGCCATGCATACCTTCTGTTCTTCCTCATGAGGTGCTTGTATGCTCCAGAAGTGGAAGTGTACACTCATTCAAACTGATTAAACTGGGAGTAGTTCTTTCGTGCTTGACATATGTAAAGAAATTATTCTCACTTAGTGTTAAGATGTATTCTGGGGAGAAAAAAGAGGAGGGGGACCTTCTGTGGGAATACAATGTTGGAGATCCAATTACTGCATCTGCCTATGTTGACGAGCACTTGCAGCTGGAATATGATGCTTCCCATTCTTCAGACAGGTTAATTTGCATTTGTTCCAGTTCAGGAGGCATACACCTTCTTCGAGTGAACGTGAATCTCTTCAGATATGCAAATCAACAAAGACGTGATGTGCAAGAATTTGCAAGGCTAAACTTGCAAGGAGATATATTCTCTTCACCTTTAATGGTTGGTGGTCGGATTTTTGTTGGTTGTCGGGACGACTACTTGCATTGTATTGCCCTTGAAATTCCTAAGCAACATGAAAGATAAAGCTTTGCTTGTTTAAATTTGTTGCACTTTAGTAGGTCGGTTGATGCAGTTTGAAATCTATGAAAATCAAGGCATACATAGGTGTAACCTAAGCTAGATGTGCTTAAAACTTACTTTATTTTCTCATATAAATAAACAAATCAAAATGTACAGAAAGCATTTATGTTGTTGACTGTAGGGATTCTTGATTGGTGAAATCTTTGTGGATTTGCTGGATTATAAATAATGATGTGTTGTAAAAATATTCGTCTTTAGATTTGATTAAAGAATAAGATTTTATGCCACCTTCAAGTTTTCTAGAGAA 4100 0.3963 MDETMLTSAVKESKIKANFCCISHEFSRIASANPDKIAVIHASGVAHLSREFRRENSTAPDFNADITTLLEKRVESTSPPLYHGDRSFTYSHVLNAVASLSSRLRSILLGADDPHLITAQSKGNAGVNREEGAVQAPESLETVMPSEGAMAESCEEYRPKIVGIYMPPSVEYIVAVLSVLRCGEAFLPLDPFWPNERILSVVSSSNVDLIIGSQSSFGKSNLDNLDETHWLVKSINCPVLNYSAENLQECSGPTDLVWPCANEKQRSFCYLMYTSGSTGKPKGVCGTEQGLSNRFLWMQGMYPLNGQELLLFKSSVSFIDHLQEFLSAILTACLLVVPPFNELKENIFSIIDFLQAYFVNRLAAVPSLMRTILPGLQTHANMRIENSLKLLVLSGETFPLTLWEMLSTTLPKTSILNLYGSTEVSGDCTYFDCKRMPLILKEEMLTSVPIGLPITNCDVMLFSETGASNEGELYVGGSCIFRGYYNKSNIMFDTFAKLPNKYSCSDSVNVYGGQLYFTTGDLIKQLSSGDFVFLGRKDRIIKINGQRIALEEVEELLREHPYVNDAAVVCRNNQAELLLLEAFIILKEKERLGELLIPAFRSWMINKLPSVVVPNHFFFMESLPVSASGKVNYELLVGSALLTKNVKDKVGNVDCGILLQFIKKAFHDTLMVEKVCKDDDFFTMGGNSLSAAHVAYSLGIDLRFLYFYPTPFKLCMALLQKKGSCPLHNRLDSCLQINTDREDNHISTNHVENSRSLESRMISNDKDDDSFPSKRLKRDLTDVTSGVDESFSWYSPSQLSFSLSRCNKVLRKGQQVVIDSHQTTRSANVPIGSRGHMNDFWKVYMESCVDASPMLVFKGTNIYLFIGSHSHKFFCINARSGSVQWETKLEGRIECTAAVVSDFSQVVVGSYKGKIYFLDFFNGDICWIFQTSGESLPPPGLSCNYVFELMKVKSQPVVDTCRQLIWCGSHDHNLYALDYKKHCCVYKLPCGGSIYGSPAIDEVRGLLYVASTGGRITAISISASPFTTLWLHELEVPVFGSLAVAHNGTVICCLVDGHVLAFDPNGSIVWKKTTDGPIFAGPCIPSVLPHEVLVCSRSGSVHSFKLIKLGVVLSCLTYVKKLFSLSVKMYSGEKKEEGDLLWEYNVGDPITASAYVDEHLQLEYDASHSSDRLICICSSSGGIHLLRVNVNLFRYANQQRRDVQEFARLNLQGDIFSSPLMVGGRIFVGCRDDYLHCIALEIPKQHER 1248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02339 1248 Gene3D - 139 537 IPR042099 -
Pste6g02339 1248 SMART ire1_9 855 888 IPR018391 -
Pste6g02339 1248 SMART ire1_9 897 930 IPR018391 -
Pste6g02339 1248 SMART ire1_9 1042 1073 IPR018391 -
Pste6g02339 1248 CDD A_NRPS 158 636 - -
Pste6g02339 1248 PANTHER BETA-ALANINE-ACTIVATING ENZYME 19 1241 - -
Pste6g02339 1248 Gene3D - 1125 1241 IPR015943 GO:0005515
Pste6g02339 1248 Gene3D - 807 1024 IPR015943 GO:0005515
Pste6g02339 1248 ProSitePatterns Putative AMP-binding domain signature. 271 282 IPR020845 -
Pste6g02339 1248 SUPERFAMILY ACP-like 657 715 IPR036736 -
Pste6g02339 1248 Pfam PQQ-like domain 989 1020 IPR002372 -
Pste6g02339 1248 Pfam AMP-binding enzyme C-terminal domain 552 630 IPR025110 -
Pste6g02339 1248 Gene3D - 1042 1107 - -
Pste6g02339 1248 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 843 1238 IPR011047 -
Pste6g02339 1248 SUPERFAMILY Acetyl-CoA synthetase-like 77 637 - -
Pste6g02339 1248 Gene3D - 538 645 IPR045851 -
Pste6g02339 1248 Pfam AMP-binding enzyme 161 543 IPR000873 -
Pste6g02339 1248 Pfam PQQ-like domain 863 936 IPR002372 -
Pste6g02339 1248 Gene3D - 658 718 IPR036736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02339 Pste-Chr6 11373585 11387869 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02339 270 636 Acyl Lipid Metabolism Gene Families AT5G36880 22.642 2.35e-15 79.3