Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02336 atgagcatcccaattcccagtcgtcagttattcattgacggagactggaaagtccccgccctcaacaaacggattcctgttatcaaccccgccaccgaacagatcatcggggatatccccgccgctaccaaggaagacgtcgacctcgctgtcgccgccgccaaagcttccctctcccgcaatcacggcgccgattgggcctccgcttccggctccgttcgcgcccgctatctccgcgccatcgccgccaagatcaccgagaagaagcccgtgctggcaaaactcgaatctattgactgtggaaaaccgctggatgaagccgcctgggacatcgacgatgttgcgggttgctttgagttctacgctgaccttgctgaaaaattggacgccagacaaaagacccctgtgtctcttcccatggatacattcaatagttatgtccttagggagcccattggggttgttggactaataacaccctggaattatcctatgttgatggccacgtggaaggttgctcctgctcttgctgcgggttgtgccgcaatattgaagccttctgaattggcatccctgacgtgtttggagctggctgatatttgcagagaagtgggacttcctcctggtgtgttcaacattctcactggtttagggcctgaagccggtgctcctttagcagcccatcctgatgtagacaagagcgggaacgatcctgctctcaaaccgttggttgctgtccaacgccgtctgccagtgagttttgtcctacgagttcagggtttggtggtgggtgagctccacacgccagccaaacagcttccatttgccagccagagtcgatactctcgtcttcaaaaaggttacaaatgttattctcctaataccaagaggtattacatgtctcctaaggttaccttctttgaggacacttccttctactcatccttcatttcaaactccatttccatccaagaggtattgcccacttccacctctagtcttgaaattgccatctcttctcaatctgatcatgcagatattcctccaactccaaattttgccggcagtgatccttcacccactagtactattcaaggcatgacacctgcagccagttccgtcgtacctgatgactctcttggctcatgtccctctccatttgcttcttcacttgatcatcctggatggcaacaagccatgattgatgaaatatggatctatgctattaaagttagtcctaatggtgaaattgatcgccttaaagatcgtcttgtagtcaaaggttacactgagatctatggtcttgattctggagatactttcttgccggccgctctccatattgccttcaatccagtatttcatgaaaggactaagcacgttgaaattgattatcactttattgcctttactggaagctctgctactggaagcaagattatgacagctgcagctcagctggtcaagcctgtttctctagagcttggtgggaaaagcccaatcattgtttttgaggatgttgaccttgacaaggctgctgaatggaccatctttggctgcttctggacaaatggtcagatatgcagtgcaacttcccgccttattgtacatgaaagtatagcgacagaatttttaaataggattgtgaaatggatcaaaaacatcaaaatttctgatcccttggaagaaggttgcagactaggccctgttgttagtgaaggacagtatgaaaagatattgaagtttatctcaaatgctaagagtgagggtgcaaccattttgactggtgggtctcgcccagagcatctaaagaagggattctttgttgaaccaactgtcataaccgatgtgactacctccatgcaaatttggagagaagaagtatttggacctgttctctgtgtaaaaacatttagcactgaggaagaagctattgatctagcaaatgacactgtatatggcttaggttcggctgtaatctcaaatgatctagaaagatgtgagcgcatttctaaggcttttagggctggaattgtgtggattaattgctctcaaccatgcttcactcaagccccgtggggaggcattaaacgcagcggttttggtcgtgaattaggagaatggggacttgacaattacttgagtgtgaagcaagtgactcagtatatctcggatgaaccgtggggctggtatcaatctccgtcaaagctgtaa 2214 0.0 MSIPIPSRQLFIDGDWKVPALNKRIPVINPATEQIIGDIPAATKEDVDLAVAAAKASLSRNHGADWASASGSVRARYLRAIAAKITEKKPVLAKLESIDCGKPLDEAAWDIDDVAGCFEFYADLAEKLDARQKTPVSLPMDTFNSYVLREPIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELADICREVGLPPGVFNILTGLGPEAGAPLAAHPDVDKSGNDPALKPLVAVQRRLPVSFVLRVQGLVVGELHTPAKQLPFASQSRYSRLQKGYKCYSPNTKRYYMSPKVTFFEDTSFYSSFISNSISIQEVLPTSTSSLEIAISSQSDHADIPPTPNFAGSDPSPTSTIQGMTPAASSVVPDDSLGSCPSPFASSLDHPGWQQAMIDEIWIYAIKVSPNGEIDRLKDRLVVKGYTEIYGLDSGDTFLPAALHIAFNPVFHERTKHVEIDYHFIAFTGSSATGSKIMTAAAQLVKPVSLELGGKSPIIVFEDVDLDKAAEWTIFGCFWTNGQICSATSRLIVHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFISNAKSEGATILTGGSRPEHLKKGFFVEPTVITDVTTSMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGSAVISNDLERCERISKAFRAGIVWINCSQPCFTQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTQYISDEPWGWYQSPSKL 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02336 737 MobiDBLite consensus disorder prediction 356 378 - -
Pste6g02336 737 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 465 719 IPR016162 GO:0016491
Pste6g02336 737 SUPERFAMILY ALDH-like 5 233 IPR016161 GO:0016491
Pste6g02336 737 PANTHER ALDEHYDE DEHYDROGENASE 459 736 - -
Pste6g02336 737 MobiDBLite consensus disorder prediction 356 372 - -
Pste6g02336 737 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 256 IPR016162 GO:0016491
Pste6g02336 737 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 12 235 - -
Pste6g02336 737 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 493 500 IPR029510 GO:0016491
Pste6g02336 737 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 521 532 IPR016160 GO:0016491
Pste6g02336 737 FunFam Betaine aldehyde dehydrogenase 497 688 - -
Pste6g02336 737 Pfam Aldehyde dehydrogenase family 465 719 IPR015590 GO:0016491
Pste6g02336 737 Pfam Aldehyde dehydrogenase family 22 233 IPR015590 GO:0016491
Pste6g02336 737 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 499 690 IPR016163 GO:0016620
Pste6g02336 737 SUPERFAMILY ALDH-like 466 723 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02336 Pste-Chr6 11352551 11359478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02336 468 735 Aldehyde Dehydrogenase Gene Family AT1G74920 85.448 9.89e-171 498
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02336 6 11352551 11359478 Pste6g02336 6 11352551 11359478 ECH
Pste6g02336 6 11352551 11359478 Pste2g00875 2 9405843 9418454 PCT