Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02327 ATGCCATCGCGCCCGCCGCCATCCACCCCTCCCGCGGCGGCCGTTAGCCACCGCCGAGAAATAATCCTCTCCGGCGCAATTGCAGGTGCTGTCTTTTTAACGGCGTTAGTAATCTCCGTCACTGTGTTTATCTATCGCAAACTCTCGTACAACCGAACGGCGCCGTTTGAACACAACCAGCGCCGTTTCTCCTACTCTGTTCTCCGTCGTGCCACGAACTCGTTCTCTCCGTCGACGAAACTCGGTCACGGAGGGTTCGGTTCGGTTCACAAGGCGACGCTCCCTTCCGGCCAGACCGTGGCGTTAAAAGTGATGGACTCGCCCGGTTCGCTGCAGGGGGAGAGAGAGTTTCACAACGAGTTGACGCTGTGTTCGAATCTGAAGTCTCCATATGTGATTTCGCTGCTCGGTTTTTCGTCGGACCGGCGCGGGCGGAAGCTGGTTCTGGTTTATGAGTTGATGCCAAACCGGAGTTTGCAGGACGCGCTTCTGGACCGGCGGTGTCCGGAGTTGATGAGTTGGGGGAAGAGGTTCGACGTCGCCGTTTCGGTGGCTATGGGGTTGGAGTATTTGCACCACGTGTGTGACCCGCCGGTGATTCATGGGGACATTAAACCGAGCAATGTGTTGCTGGACCGGGATTTTTGTGCCAAGATTGGGGATTTTGGGCTGGCTAGGGTTAAGGCGGTGGAGGATCTGGGAATGGTGGATGAGAATGAGAAGAAGAAGGATGAGGAGTTTAGTGTGATGGAGGAGGGTGAGAGTGTGGTGGATGTGGAGCGCTCGCCGGAGAGTTGTCCGGTGAGGATTTTGGATTCCGATGCTTCGCCGGTGGGGGGTGATAAGTTGAGTGTGGTGTCTGATGGTGCTTGTTTTGATAGTGTTGATAGTGGGAGTGTGAGTGTGAATAAGAAGAAGGGTTATGGTGGTTCAGGGAGGGATTGGTGGTGGAGGCAGGAGAGTGGGGGAGGTGGGGAATCGGGGAGGGTGAAGGATTACGTGATGGAGTGGATCGGGAGTGAGATAAGAAAGGAGAGGCCCAAGAGTGAGTGGGTTGATTCGTGTTCTTCTTCTTCTCCTAAGATGGAGAATGAGAATTTGAATGAGGATGGTAATGGGAGTGGCAAGAGTAAGAGTAAGAAGAAGAAGGAGAGGAAGAGGTTGGATTGGTGGGCTTCGCTTGATGAGGAGAGGATGAAGGGTAAGGTGAAGAAGAATAGGAAACCCCGGGAGTGGTGGAAGGAGGAGTTTTGCGAGGAATTGTCCAAGAAAAGTAGGAAGAAGAAGAGGGGAATGGAGTGGTGGCAGAGGGAGGAGGAAGGGGTGGAGCAGAAGAGGAAGAGGAAGAGTAAGGGGAGTAGAGGGAGTATTGATTGGTGGTTGGATGGGTTGAGTGGGGAGATAAGGAAAAATGGGAGGAGGAATAGCCAGGATTGGGGAGCTAGTGGGGATGTGCCAAAGAGTGGTGGGATTAGTAGCACTCCTAGTATGAGGGGGACTGTGTGTTACATTGCTCCTGAATATGGTGGTGGGGGGCAGTTGTCTGAGAAGTGTGATGTGTATAGTTTTGGTGTTCTGCTTTTGGTTCTTGTGGCCGGCAGGCGGCCTCTGCAGGTGACGGCCTCGCCAATTTCCGAGTTTGAGAGGGCTAATTTGATTTCCTGGGCCAGGCAGCTTGCTCACAGTGGGAGGCTTTTGGATCTTGTTGACACTTCAATTCATTCCTTGGATAAAGAGCAGGCTCTGCTCTGCATCACCATTGCTTTGTTGTGTCTGCAGAGGTCCCCTGCCAAGAGGCCTTCCATGAAGGAGGTTGTGGGTATGCTTAGTGGGGATGCTGAGCCTCCACACTTGCCTTTTGAATTCTCACCATCGCCGCCCTCAAATTTCCTGTTCAAGGCCCGGAAGAAGGCCAGGTGA 1920 0.5344 MPSRPPPSTPPAAAVSHRREIILSGAIAGAVFLTALVISVTVFIYRKLSYNRTAPFEHNQRRFSYSVLRRATNSFSPSTKLGHGGFGSVHKATLPSGQTVALKVMDSPGSLQGEREFHNELTLCSNLKSPYVISLLGFSSDRRGRKLVLVYELMPNRSLQDALLDRRCPELMSWGKRFDVAVSVAMGLEYLHHVCDPPVIHGDIKPSNVLLDRDFCAKIGDFGLARVKAVEDLGMVDENEKKKDEEFSVMEEGESVVDVERSPESCPVRILDSDASPVGGDKLSVVSDGACFDSVDSGSVSVNKKKGYGGSGRDWWWRQESGGGGESGRVKDYVMEWIGSEIRKERPKSEWVDSCSSSSPKMENENLNEDGNGSGKSKSKKKKERKRLDWWASLDEERMKGKVKKNRKPREWWKEEFCEELSKKSRKKKRGMEWWQREEEGVEQKRKRKSKGSRGSIDWWLDGLSGEIRKNGRRNSQDWGASGDVPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHSGRLLDLVDTSIHSLDKEQALLCITIALLCLQRSPAKRPSMKEVVGMLSGDAEPPHLPFEFSPSPPSNFLFKARKKAR 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02327 639 MobiDBLite consensus disorder prediction 429 454 - -
Pste6g02327 639 MobiDBLite consensus disorder prediction 348 384 - -
Pste6g02327 639 SUPERFAMILY Protein kinase-like (PK-like) 49 628 IPR011009 -
Pste6g02327 639 SMART serkin_6 75 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02327 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Pste6g02327 639 Pfam Protein kinase domain 478 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02327 639 Pfam Protein kinase domain 78 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02327 639 MobiDBLite consensus disorder prediction 352 373 - -
Pste6g02327 639 MobiDBLite consensus disorder prediction 471 491 - -
Pste6g02327 639 MobiDBLite consensus disorder prediction 429 447 - -
Pste6g02327 639 Gene3D Transferase(Phosphotransferase) domain 1 154 250 - -
Pste6g02327 639 Gene3D Transferase(Phosphotransferase) domain 1 468 615 - -
Pste6g02327 639 Gene3D Phosphorylase Kinase; domain 1 39 153 - -
Pste6g02327 639 MobiDBLite consensus disorder prediction 617 639 - -
Pste6g02327 639 ProSiteProfiles Protein kinase domain profile. 75 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02327 639 ProSitePatterns Protein kinases ATP-binding region signature. 81 103 IPR017441 GO:0005524
Pste6g02327 639 PANTHER OS07G0586332 PROTEIN 3 639 IPR044576 -
Pste6g02327 639 MobiDBLite consensus disorder prediction 475 491 - -
Pste6g02327 639 FunFam Os07g0541700 protein 154 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02327 Pste-Chr6 11277880 11279799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02327 487 609 Receptor kinase-like Gene Family AT3G58690 37.209 7.95e-14 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Pste6g02327 Pkinase 1.6e-25 CL0016