Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02310 atgtccctcaagcgccgccccgatgatggcaaaactcccgacgacaagcgcaggaagccgcctccattctccagtgtggtgcgggacgtgatgaagttacaatcacttacgcatttattggagccgattctagaacccttggttcgcagagtggttaaggaagaagttgaagctgccctaaagaggcatttaaccagtatgaaacagacctgtggaaaggagttgcatactgctgaattaagaagtctgcagctgcagtttgaaaacagcatttctcttcctgtctttacaggagctcgaattgaaggagaggatggctccaacttaagaataagtttagtcgatgccttaacagggaaggttgttagtacaggacctgaatcgtcggctaaggtggaaattgtagtccttgaaggtgattttgaagaagaaagtgatatttggatgtctgaagagttcaagagcaatattgtgagagagagggaaggaaaaaagccccttcttacaggagatgtaattttatatcttaaagatgggattggtatggtgggtgaaatttcatatacagataattcaagctggacaaggagccgtaggttcaggcttggggcaagagttgcggacaactttgatggtgttagaataagagaagcaaagacagaatcatttatagtcagggatcatagaggagaattgtacaaaaagcaccatcctcctagtttgtctgatgaagtttggagattggagaagataggcaaggatggagcttttcacaagcgtctgagtcgggaaaagattcacaccgtcagagagtttctcacacttctcaatctggatccagcaaagctgcgcagtatactgggaactgggatgtcagcaaagatgtgggaagtaacagtggatcatgctcggacttgtgtacttgatacaacgaggcatctgtacttcccttctaattctcaagaacctggtgtggtcttcaatgctgtgggacaagtgacaggactgctttctgaatgcgacaatatgattttccaccttcaggctgaagctcaaaactctgttactgctgcattaagacaaggagagaaatatgcaactttcgaagatgaagactctcttatggatgggtcttcacacttaactagtgtacatcactccccaagctcacccaagactgagggatcaagtgccaacaagcttttgggtccccaaaagactggaggattcaattacccacaagcaagttcatcttctcctgatatcatatcatccatttattctgttggtggaactagtagcttggatgactattgcttgccttttgaaagcatgggccttagatatgatcagaccctcagttttccagtccaggtgtccaactctttgatctgtgacactgattcaatggctcatgcttttagtgaagatcatctgcaattttttgataacgaacttcaatctcacgttcaagcagatttgcagagtgctattgatagcttcatgcagccacgtgctacagccaatggtggtgcacagaggagatggagaaaggtatgtaacgtcttaaaatggttccttgttgggaaacgaggaaaccgattacacgtaaagttgtga 1620 0.0 MSLKRRPDDGKTPDDKRRKPPPFSSVVRDVMKLQSLTHLLEPILEPLVRRVVKEEVEAALKRHLTSMKQTCGKELHTAELRSLQLQFENSISLPVFTGARIEGEDGSNLRISLVDALTGKVVSTGPESSAKVEIVVLEGDFEEESDIWMSEEFKSNIVREREGKKPLLTGDVILYLKDGIGMVGEISYTDNSSWTRSRRFRLGARVADNFDGVRIREAKTESFIVRDHRGELYKKHHPPSLSDEVWRLEKIGKDGAFHKRLSREKIHTVREFLTLLNLDPAKLRSILGTGMSAKMWEVTVDHARTCVLDTTRHLYFPSNSQEPGVVFNAVGQVTGLLSECDNMIFHLQAEAQNSVTAALRQGEKYATFEDEDSLMDGSSHLTSVHHSPSSPKTEGSSANKLLGPQKTGGFNYPQASSSSPDIISSIYSVGGTSSLDDYCLPFESMGLRYDQTLSFPVQVSNSLICDTDSMAHAFSEDHLQFFDNELQSHVQADLQSAIDSFMQPRATANGGAQRRWRKVCNVLKWFLVGKRGNRLHVKL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02310 539 Pfam Calmodulin binding protein central domain 240 306 IPR046830 -
Pste6g02310 539 MobiDBLite consensus disorder prediction 1 23 - -
Pste6g02310 539 Pfam Calmodulin binding protein-like N-terminal domain 83 228 IPR046831 -
Pste6g02310 539 PANTHER OS02G0177800 PROTEIN 16 465 IPR012416 GO:0005516
Pste6g02310 539 MobiDBLite consensus disorder prediction 377 417 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02310 Pste-Chr6 11158178 11162954 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02310 1 359 Calmodulin-binding Proteins AT5G62570 58.743 5.63e-151 436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02310 6 11158178 11162954 Pste6g02310 6 11158178 11162954 ECH