Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02298 CATGCAGGAGACAATTGAACGATACCGCAGGCATACCAAGAATGATAATCCAGCTACATTCAGATCAATTGAACAAAATATGCAGCATTTGAAGCAAGAAGCAGCTAACATGATGAAGAAGATAGACCTTCTTGAAGCTGCAAAACGGAAATTACTGGGAGAAGGTTTAGGGGCTTGCTCCGTCGAGGAACTGCAACGAATAGAACTACAGTTGGAGAGGAGTTTAAGTAATGTTCGAGCAAGAAAGATCCAGATGTTCAAGGAACAAATTGAGCAACTAAAAGAAAAGGAAAAAGCCCTACTAGATGAAAATGCCAGGCTCTCTGAAGATGCCATGCTCGCTGAGAAGCATGGTATCCATCTACAGCAAGCAACAAAGGATCAGAATGAAAATCAACCCCAACACTTCTTAGAAAGTAGCCCAAGTTCAGATGTGGAGACCGAATTGTTCATTGGACTTCCAGACACCAGAATAAGACGCATCTCTCATCAGGCTGAT 499 0.4248 MQETIERYRRHTKNDNPATFRSIEQNMQHLKQEAANMMKKIDLLEAAKRKLLGEGLGACSVEELQRIELQLERSLSNVRARKIQMFKEQIEQLKEKEKALLDENARLSEDAMLAEKHGIHLQQATKDQNENQPQHFLESSPSSDVETELFIGLPDTRIRRISHQAD 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02298 166 Pfam K-box region 24 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pste6g02298 166 ProSiteProfiles K-box domain profile. 27 119 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pste6g02298 166 Coils Coil 20 54 - -
Pste6g02298 166 Coils Coil 83 110 - -
Pste6g02298 166 MobiDBLite consensus disorder prediction 125 146 - -
Pste6g02298 166 Coils Coil 61 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02298 Pste-Chr6 11051029 11058711 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02298 1 98 MADS-box Gene Family AT2G45660 69.388 6.66e-40 130
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02298 6 11051029 11058711 Pste6g02298 6 11051029 11058711 ECH
Pste5g01608 5 10291674 10310143 Pste6g02298 6 11051029 11058711 PCT