Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02286 ATGGACATGGCCACTTCAACAAGCTTACTAGCAATGATGCTTGTGTTCATGTGGGAGTTGGACAATTTGTCATCACTCCCACTCTCCGTTGAGAAAGCCGACGAAGACGTGATAGTCTCATCGCCGAAAGGAGCGTTCACGGCAGGGTTCAGTCCCGTTGGTGAAAACGCGTATTGCTTCGCCATATGGTTCTCCCAACCTCAGAAAACCGTCGTGTGGATGGCCAATCGCGACCAACCCGTCAACGGAAAACGCTCCACTCTTTCCCTTCTCAAGACAGGCAACCTTGTTTTATCCGACGCCGGCCAGTTCCAGGTTTGGTCCACCAACACCCTCTCTTCCGACCCTCTTCAGTTGCATTTGTTCGACAACGGTAACCTCGTACTCCGCCTCCAGAACAATAAATCCTCTGTTTTGTGGCAGAGTTTTGATTTTCCAACTGATACTCTCCTTCCTGCCCAACTTCTCACTAGGTTCACGAAGCTTGTTTCGTCGAGAAGTGAGGGCAACCATTCCTCTGGTTTTTACAAGCTCTTCTTCGACAATGACAACGTGTTTCGTCTTCTATACGAGGGCCCTCAGGTTTCAAGTGTTTACTGGCCAGATCCTTGGCTTGTCAGCAACAACGTTGGAAGTGGTAACGGGAGATCCACGTACAATAGTAGCAGATTCGCAGTGTTAGATGAGTTGGGCAAATTCGGTGCTTCTGATCATTTCAGTTACAAAACAATTGACTATGGGTTACTCCTCCAACGAAGATTGACCCTTGATCATGATGGCAATGTTCGTGTCTATAGCAGAGGAAATGGTGAAGAAAATTGGTCAATAACAGGGCAATTTAAATCGCAACCTTGTTTCATTCATGGGATTTGTGGACCCAACAGTATCTGCGCTTATGAACAGGCCATTGGTAGAAAGTGTACGTGTCTTGAAGGGTATAGTTGGATTGATAGCCAAGATTGGACTTTAGGTTGCAAACCAAATTTCCAACCAACTTGTGACAACAAGACAGAATATCGCTTTGTATCCTATAAAGAAGTGGATTTCTATGGATATGACTACGGCTCATCCTTTTCAAATTATACTTATAAACAATGTGAGGATCTGTGTTTGAGTTTGTGCGAGTGCATGGGCTTTCAATACTCCTTTGCAGCAGTAAATGGTCTCTTTTGGTGTTATCCAAAGACACAGTTGCTAAATGGGCATCATTCACCGGGTTTCACAGGACAAATCTTCTTGCGTTTGCCCAAAAACAATGTTCAAGAGAATCATATCCAAAACAATGGTGGTTTGGTTTGTTCGAGAAATGCAGAAAAACTACTACAAAGACCATATGTGAAAGGCAAGGAAAATGGGTCGGTGAAGTTCATGCTTTGGTTTGCAATTGGGTTGGGAGGGTTTGAGGTTGTGTGCATATTTATGGTGTGGTTTTTCCTGTTTAGGAGTAGCAACCGTTTGGTTAGTGTAGACCAACAAGGATATGTTCTAGCAGCAGCTACAGGGTTCCGAAGGTACACGTACTCTGAACTAAAACAAGCCACAAAGGGTTTTAGTGAAGAGATTGGAAGGGGTGCTGGAGGGACTGTGTACAAGGGTGTGTTATCAGATAACCGAGTTGCAGCAATTAAAAAGCTACATGAATTTGCAGACCAAGGAGAGAGTGAGTTCCTCACTGAAGTAAGCATCATTGGGAGGCTTAACCACATGAACTTAATTAGGATGTGGGGGTTTTGTGTAGAAGGAAAACACAGGATGTTGGTTTATGAGTACATGGAAAATGGCTCTTTGGCCCATAATCTTCCTTCAAATTCACTTGATTGGAGCAAGAGATACAACATTGCAGTGGGAATGGCAAGGGGTTTGGCCTATTTACATGAAGAGTGCTTGGAGTGGATTTTGCATTGTGATATAAAGCCTCAAAACATACTTCTTGACTCTGATTACCAACCCAAGGTGGCTGATTTTGGCTTGTCCAAGCCATTGAATAGAAACAACCCCAACAACTCAAGCTTCTCGAGGATAAGAGGCACAAGGGGTTACATGGCACCAGAGTGGGTTTTCAACATGCAAATCACTTCCAAGGTGGATGTTTATAGCTATGGAATTGTTGTGTTGGAGATGATAACTGGGAGGAGTCCTATGATGGGTATCCAAGTCACAGAGTCTCATAATGAGAGGTTGGCAACATGGGTGAGGGAGAAAAGGAGGAATGCACCACAAGGGGCACGTTGGGTGGAACAGATTGTAGACCCTACTTTGGGATCGGATTATGATGTGAAGCAAATGGAGATACTGGCAAAAGTGGCTTTGGAATGTGTAGAGGAAGAGAAAGATGTGAGACCAAGCATGAGTCAAGTTGTCGAAAGGCTCCAAAGTCATGAACATGATTCCTAATAATCTCTTGGGTCTCTATCACTTTCCTGTTTATCATTTTCATCAGCTTAAAGGAGTGGTTTTGTCTGTTGAGAAGTTGAGTAGGTTTAGTTTGGCATCTACTTAATGTGAATCCATCTTGAAGTTATTCTCATGTTCAATACTTAGACAAGGATTTCCAAACACTTTTTAAGTGATATAGTTTGAATATTTTGTATAAAAAAAATAAATGTAAGAAATTGATCCTATAAGAGTACCGTACTTCAAATAAGGGTTATTTTAAACTTAAATGAAGTATGAAACATGTTAAAACTGTTATTAAAACGGGTCTACTTTTACACAATAATTTAAACAGTGTTAGAGGAAGTATGTTAGGGTAGAGAAGATGAGATGAGATGGGCAACCAAGCAAGCGGGAAAAAAGGAGTATAGAATTGATGAAGATGAGGTGGAGGCGTGACATGATTTGGGGTTAATAGGCTTTTATTAATGATTTATGATAGAGCTATGAAGAGACGAATTTGTAGTCCCACTTGTTGTCTTTTTGAACAAATGCAGAG 2932 0.4219 MDMATSTSLLAMMLVFMWELDNLSSLPLSVEKADEDVIVSSPKGAFTAGFSPVGENAYCFAIWFSQPQKTVVWMANRDQPVNGKRSTLSLLKTGNLVLSDAGQFQVWSTNTLSSDPLQLHLFDNGNLVLRLQNNKSSVLWQSFDFPTDTLLPAQLLTRFTKLVSSRSEGNHSSGFYKLFFDNDNVFRLLYEGPQVSSVYWPDPWLVSNNVGSGNGRSTYNSSRFAVLDELGKFGASDHFSYKTIDYGLLLQRRLTLDHDGNVRVYSRGNGEENWSITGQFKSQPCFIHGICGPNSICAYEQAIGRKCTCLEGYSWIDSQDWTLGCKPNFQPTCDNKTEYRFVSYKEVDFYGYDYGSSFSNYTYKQCEDLCLSLCECMGFQYSFAAVNGLFWCYPKTQLLNGHHSPGFTGQIFLRLPKNNVQENHIQNNGGLVCSRNAEKLLQRPYVKGKENGSVKFMLWFAIGLGGFEVVCIFMVWFFLFRSSNRLVSVDQQGYVLAAATGFRRYTYSELKQATKGFSEEIGRGAGGTVYKGVLSDNRVAAIKKLHEFADQGESEFLTEVSIIGRLNHMNLIRMWGFCVEGKHRMLVYEYMENGSLAHNLPSNSLDWSKRYNIAVGMARGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGLSKPLNRNNPNNSSFSRIRGTRGYMAPEWVFNMQITSKVDVYSYGIVVLEMITGRSPMMGIQVTESHNERLATWVREKRRNAPQGARWVEQIVDPTLGSDYDVKQMEILAKVALECVEEEKDVRPSMSQVVERLQSHEHDS 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02286 797 Pfam S-locus glycoprotein domain 239 313 IPR000858 GO:0048544
Pste6g02286 797 SMART blect_4 30 146 IPR001480 -
Pste6g02286 797 ProSitePatterns Protein kinases ATP-binding region signature. 521 544 IPR017441 GO:0005524
Pste6g02286 797 PANTHER OS07G0415500 PROTEIN 28 793 - -
Pste6g02286 797 CDD B_lectin 40 146 IPR001480 -
Pste6g02286 797 CDD STKc_IRAK 521 791 - -
Pste6g02286 797 CDD PAN_AP_plant 329 416 - -
Pste6g02286 797 FunFam S-receptor-like serine/threonine-protein kinase 483 590 - -
Pste6g02286 797 SMART serkin_6 515 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02286 797 Gene3D Transferase(Phosphotransferase) domain 1 591 797 - -
Pste6g02286 797 Gene3D - 29 145 IPR036426 -
Pste6g02286 797 FunFam Serine/threonine-protein kinase 591 797 - -
Pste6g02286 797 Pfam Protein kinase domain 518 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02286 797 Pfam D-mannose binding lectin 70 157 IPR001480 -
Pste6g02286 797 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 201 IPR036426 -
Pste6g02286 797 PIRSF SRK 1 797 IPR024171 GO:0004674
Pste6g02286 797 SUPERFAMILY Protein kinase-like (PK-like) 499 791 IPR011009 -
Pste6g02286 797 Gene3D Phosphorylase Kinase; domain 1 482 590 - -
Pste6g02286 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Pste6g02286 797 ProSiteProfiles Protein kinase domain profile. 515 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02286 797 ProSiteProfiles Bulb-type lectin domain profile. 24 142 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02286 Pste-Chr6 10955694 10959632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02286 505 794 Trihelix Transcription Factor Family AT5G38560 42.373 5.77e-68 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pste6g02286 Pkinase 1.3e-54 CL0016