Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02278 ATGATATATGTTCATTCAAAAGGCATGATAGTTGATGATGAATATGTCATATTGGGGTCTGCAAACATCAACCAGCGCTCTATGGAAGGGACAAGGGACACCGAGATTGCAATGGGAGCCTACCAACCTAATCATACCTGGGCAAGAAGACAGTCATATCCCGGTGGACAGATCCATGGATATAGAATGTCACTTTGGGCGGAACATACTGGTACTATTGAAGACTGCTTCTTACAACCAGAGAGCCTTGAATGTGTTAAGAGGGTTAGAATAATGGGTGAACTGAACTGGAAACAATTTGCATCAAGTGATGTAACAGAGATGAGAGGGCATCTGCTCAAGTACCCGGTAGAAGTTGATCGAACGGGTAAGGTAAGATCTCTTCCTGGCCATGAAGAGTTCCCAGATGTGGGAGGAAAGATAGTTGGATCATTTATTGCCATTCAGGAGAATCTAACCATTTGATTATGTTTCCACATAAATTGCTGGCCATTAGCATATAGGATGGATGTAAATTACAAACAACTTTGAAATGCAATATAGTTGTAGAAACACCAACTCCCTCTGTATAGTAATAAAATCTTTTTCATTTTTCTTGTATATATATGAACCGCTTGCTACATATTATAACTCCCTCCTTCTCTATAAGTCAGGCTCGCTTACTATCGGGAACACCATGTTTTGTAAACTTGTAATTTAAAGAGCTACTTAGTTTGTTATGAAAG 725 0.3945 MIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPNHTWARRQSYPGGQIHGYRMSLWAEHTGTIEDCFLQPESLECVKRVRIMGELNWKQFASSDVTEMRGHLLKYPVEVDRTGKVRSLPGHEEFPDVGGKIVGSFIAIQENLTI 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02278 154 SUPERFAMILY Phospholipase D/nuclease 2 86 - -
Pste6g02278 154 Gene3D Endonuclease Chain A 2 61 - -
Pste6g02278 154 SMART pld_4 1 27 IPR001736 GO:0003824
Pste6g02278 154 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 1 27 IPR001736 GO:0003824
Pste6g02278 154 PANTHER PHOSPHOLIPASE D 1 144 IPR015679 -
Pste6g02278 154 Pfam Phospholipase D Active site motif 1 27 IPR001736 GO:0003824
Pste6g02278 154 Pfam Phospholipase D C terminal 74 144 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02278 Pste-Chr6 10923235 10924537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02278 1 154 Phospholipase D Gene Family (Wang group) AT2G42010 80.519 4.64e-87 273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02278 6 10923235 10924537 Pste6g02278 6 10923235 10924537 ECH