Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02261 ATGAGTTCTGGCAGTACCAATTTGGTGACTACTATCATTGGGTTTGGGTTGAGTGCAACTTTCATTGTATTCGTCTGCACAAGAATAATCTGTGCAAGACTACGAGAGGGTCTGCGATCACGGACTATATATGAAATTCAATCAAGAACAGATATAGAACGGCCAGAATATCATTGTAATGACCCCGCACCTGCTTTTGTTGCTGCAATCCCAACTTTGAATTTCAACCATCAAGTCTTCAGTTCAATTGAAACTACACAGTGTGTGATATGTTTGGCAGAGTACAAAGAAAAAGAACTGTTGCGGATCATACCAAAATGTGGCCACACTTTTCACCTTTCTTGCATTGATATGTGGCTGAGAAAACAATCCACATGTCCCGTGTGTCGTTTGTCACTGCAGAATGCTTCTGAAACAAAACATGTGAGACATGTAACATTTACCATTAGGCCTTCTCTTGATGAGCCCAATTCGGATGCTTCAGAAAGGAACACAGATAATGAGAGGCAAGTTGAACTTAATTCTAGTAACTCCCCACAATCAACTTCAGGAGAATCAGATAGCCAAGTTGAACTTAATTCCAGTAACTCCTCACAATCAAGTTTGGGAGAACCAGTAGCTAGACATTGA 630 0.4063 MSSGSTNLVTTIIGFGLSATFIVFVCTRIICARLREGLRSRTIYEIQSRTDIERPEYHCNDPAPAFVAAIPTLNFNHQVFSSIETTQCVICLAEYKEKELLRIIPKCGHTFHLSCIDMWLRKQSTCPVCRLSLQNASETKHVRHVTFTIRPSLDEPNSDASERNTDNERQVELNSSNSPQSTSGESDSQVELNSSNSSQSSLGEPVARH 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02261 209 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Pste6g02261 209 PANTHER OS11G0150450 PROTEIN 1 184 - -
Pste6g02261 209 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 140 IPR013083 -
Pste6g02261 209 MobiDBLite consensus disorder prediction 147 209 - -
Pste6g02261 209 CDD RING-H2_EL5-like 87 130 - -
Pste6g02261 209 SUPERFAMILY RING/U-box 87 139 - -
Pste6g02261 209 Pfam Ring finger domain 87 130 IPR001841 -
Pste6g02261 209 SMART ring_2 88 129 IPR001841 -
Pste6g02261 209 MobiDBLite consensus disorder prediction 170 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02261 Pste-Chr6 10807512 10808673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02261 82 172 C3H Transcription Factor Family AT4G10160 37.363 5.01e-18 77.4