Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02248 atgaaaaccctctgcttcaagcttgtttcaattattccttccaagtacctcaaacccactaaggacgtgctttctcagcaggatcagctggatctagcagccacgtacataaagcatctgaaggaaaaaatagagaaactgaagggggagaaggagcaggccatgagatcaaaccaaaacaagaataggattttcgatattggctctcagtctcagatgcctttacttgagataaaggacttgggttcgggaattgaagtgatgttggtaactgggttgaataagaacttcatgctctacgaagttattagtgtccttgaggaagagggcgctgaagtggtcactgctaacttctctaacgtcgatgataagatcttttacactgttcatgctcaggttaaaatatcaagagttggtgttgagccaaccagggtatatcaaaggcttcaggagttgattgcaccactagaaaactgggagtacatatcatga 492 0.0 MKTLCFKLVSIIPSKYLKPTKDVLSQQDQLDLAATYIKHLKEKIEKLKGEKEQAMRSNQNKNRIFDIGSQSQMPLLEIKDLGSGIEVMLVTGLNKNFMLYEVISVLEEEGAEVVTANFSNVDDKIFYTVHAQVKISRVGVEPTRVYQRLQELIAPLENWEYIS 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02248 163 Gene3D - 1 66 IPR036638 GO:0046983
Pste6g02248 163 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 152 - -
Pste6g02248 163 Coils Coil 30 64 - -
Pste6g02248 163 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 2 59 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02248 Pste-Chr6 10751319 10752365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02248 1 153 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 32.727 2.11e-19 79.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02248 6 10751319 10752365 Pste2g00853 2 9130610 9132033 ECH
Pste6g02248 6 10751319 10752365 Pste6g02248 6 10751319 10752365 ECH
Pste6g02248 6 10751319 10752365 Pste2g00853 2 9130610 9132033 PCT