Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02238 AGTTGAGATGGATGGGGACACCGAGCGCCGTCGTAGCCTTCATGTGCATCACCGGAGCACCGGTGTCCGTCGCCGCCGGAGATTAGGGGAATGTGGAGGCAATCTAAATGAAGCTATTAATGCCCATTTTCTTGAAGGGGAAAGGCACAAGTATGGCAATGTAGTGATTATCAAATCAACGAGTCTCCGACCACCTCATGCGACAGATCATTGTCAGAATAAATACCCTTTTGCTCAGTGGAACGCCTCACATGATTCTGATACTGAATTAGAGGAATCATTGGTGTTCAAGCAGCGATTGAGACCTAAAAAATGGAGAGCATATGGGAGTAATTTTCAACCGGAAGATGATGATTTGGCTCTTGCAATTTCGTTGTCCACAGAGACGACAGAGCAACAGAAAGCAGCGCGTGAGCTTCTAGTAGTAGAGAAAAGGGAAGACCTTGGTGTTCATAATTTATTACACAACGGAAAGAAAAAGAGCAGTTGCACAAGCCAATTTGAGCTACAAAGGATTAGGCAAACTTTCTCTTCGGTATTGGGCTCCCTTTATGTATCCAGAAAAGATCCAGAAAAAGGTGATTTTCAAATCCACCCAACCATGGTCACGCCGGACACCGTCGCTGCCTTTATGCGCATCACCGGAGCACCAGAGTTCGTCGCCGTCCAGAAATTAGAGGAATACGCAGGCAATCTAAATGAAGCTATTAATGCCCATTTTCTTGAAGGGGGTAGGCTCATATTATCTGGTCAAGGGCAAAATCTTGCTGCAGTCCCACAATATAATAACTCTGGTGCAAGTAATCAAAGCCATGGTCGTGGATCAAGTGGAATCTTTCCTTTTCTAAATGCTGCTAGAAGATTTCGACCTTCACTATTACTTGACCCAAATTATAGGAGAGAACTCAGAGATCTATATAATGGGATTGGCGGTGGTGCCAGTGCATTTACGAATCACCCACCATCTCTTACTTCCCATCCAGCAGAGGTGGGGGAAGTTCCTGCGAGGATCAATAGTGCATTCGGTCCGCATTATCAATCAGCATTGAACACTACAGGTGCAGATCTGACTGGTAATTTATCATCTCAAGGTTTAGGAACTCCTCGGACAGATGGTTATCAGAACGAATACCCTTTTACCCAGTCAAATGCCTCACATGTTCCTGATACTGACATAGAGGAAGCAATGCTTCAAGCAGCGATAGAGGCCTCAAGAAAGGAGAGGAGAGGAGGTTCTTCAAGGGAGCAAATTGATGCTCTTAATGACTCATCTGATGGTGGGCTTTCTCAAAGTCATTTTCAACAAGAAGATGATGAGCTGGCTCGTGCAATTTCGTTGTCCTTAAAGTCGGCAGAGCAAGAGAAAGCGATACGGGAGCTTCTAGTAGTAGAGGAAAAGAATGAGGTCGGAGTTCATGATGTATTAGACAAGGGAAATAAAATCAACAGTAGCAGAAGCCAATTTGAGTTAGGAACATCATCTAATCAAAGTGTAGCTCAAGATGTTGCACAATCAGTCCTTGGTCATTCATCAAATCAGAGTGCTGGTGGTTATAGTCAGCAAAATGAAGATGTGCTTCTTGCTGACAACTGGGGTGGTATTTCTTCTGAAGAGCTTAATGAAGCATTGTTAGTTGAAACTGCTTTTTTTGGTTCGAATCATGGTTCTCACAATTTTTCATCCTTGCCTAATCTGCAACGTCCAGAAAAAAATGTGGATCCCAAGATGCAGTATCTGTCCACTTCTATGTCACAATTATTGGCTGACTCTCGTTTGCTGAAACAACAACAGGATGCTGACTATCTAGCATCACTACAAGCTGATAAACAAAAGGAATTGAGTTCTCTCAATAAAGCTGAAAGCCTTTCCTCAAAGGAAGAAGAGTCATGCAAAAAGATGCTTGAAGAAAAGAAATTGGGGGCAACGCATGACAAAAAAGAAGTTATGCTTTCCAAGGAACCAATGTTATGTGATGAAGTAATTACTATTGTTGTTCGAATGCCAGATGGTGGTCGTTGTGAACGTCGCTTTCTCAAAACTGACAAACTAGAGGTAAAGTCATACCCGCGTTGTGCCTACAGTATCAATGATTGCTCGTCAACCTTCAATGAAGGAATTTCGTGGTTGTGTTTGATGGAGCATTTGATGGCTACATCTAGTGTGAAGCATCTCACGGTCATGTTTAGTTTATGTGCTTGTGCAAATATTGGCGGTTGGCAGTTACAGAGGCGTCCAAGTATCCAAATTCCAACGGTTTCAGACAGCGGTTGGGCCCCACACAAAGTCGAAGAATTTAACTATAAGAACGTAAGATCACTGTCCCCATACTGCACACACACTACCATCCACCCAAACATGGCCACCGCCGACGACGTCGCCGCCTTCACCACCATCACCGGAGAACCGGAGTCCGAGCATGAAGGCAATCTTAACGACGCTGTTAATGGCCATTTTCTTGAAAGGGAAACGCACAATAATCAAAACCCTTTAGCTCAGTCAAGCGCTTCACATGTTCCTGATGCTGAAATAGAGGAAGCAATGGTTCAAGCAGCAATAATGGCCTCAAAAATGGACGAGAGTGGACGTTCTTCATGGGAGCAAATTGATGTTCTTAATGATTCATCTGATGGTGACCTTGCTCAAAATCTTTCTCCAGACAAGCAAGAAGAGTTTGCCCGTGCAATTTCGTTGTCCTTAGAGGAGGACGACGATCTAGAGTCAACACAATCTGATAAAGAGGGATTGACTTATATGACTAATATCAAGACTCACCTTGCTTGTCAGGATTCATCTTATCGCAAGCTTTCACAAAAATTTTCTCTACAAGATGAAGATTTGGCCCGTGCATTTGTGATGCACTTAAAGGACAACGCTTATTATCTAGAGTCACAACGATCTGATTCAGGATATGGATTAGAAACTCCCCCTAGCAACACTGCATCAGAGGAAGAAGCATCCAGAAAGTTCATTCTGGGATCGGATGAAATGGCTCAAGTAATCACTATTGCTGTTCGAATGCCAGATGGTCGTCGCCTTGCTCGTTGCTTTCGAAAAACTCAGACATTTCAGGATCTTTTCAATTTCGTAGACAATGTTGGATTTCGAGCAAAAGAGTCTAGAAACTATAGA 3130 0.4342 MDGDTERRRSLHVHHRSTGVRRRRRLGECGGNLNEAINAHFLEGERHKYGNVVIIKSTSLRPPHATDHCQNKYPFAQWNASHDSDTELEESLVFKQRLRPKKWRAYGSNFQPEDDDLALAISLSTETTEQQKAARELLVVEKREDLGVHNLLHNGKKKSSCTSQFELQRIRQTFSSVLGSLYVSRKDPEKGDFQIHPTMVTPDTVAAFMRITGAPEFVAVQKLEEYAGNLNEAINAHFLEGGRLILSGQGQNLAAVPQYNNSGASNQSHGRGSSGIFPFLNAARRFRPSLLLDPNYRRELRDLYNGIGGGASAFTNHPPSLTSHPAEVGEVPARINSAFGPHYQSALNTTGADLTGNLSSQGLGTPRTDGYQNEYPFTQSNASHVPDTDIEEAMLQAAIEASRKERRGGSSREQIDALNDSSDGGLSQSHFQQEDDELARAISLSLKSAEQEKAIRELLVVEEKNEVGVHDVLDKGNKINSSRSQFELGTSSNQSVAQDVAQSVLGHSSNQSAGGYSQQNEDVLLADNWGGISSEELNEALLVETAFFGSNHGSHNFSSLPNLQRPEKNVDPKMQYLSTSMSQLLADSRLLKQQQDADYLASLQADKQKELSSLNKAESLSSKEEESCKKMLEEKKLGATHDKKEVMLSKEPMLCDEVITIVVRMPDGGRCERRFLKTDKLEVKSYPRCAYSINDCSSTFNEGISWLCLMEHLMATSSVKHLTVMFSLCACANIGGWQLQRRPSIQIPTVSDSGWAPHKVEEFNYKNVRSLSPYCTHTTIHPNMATADDVAAFTTITGEPESEHEGNLNDAVNGHFLERETHNNQNPLAQSSASHVPDAEIEEAMVQAAIMASKMDESGRSSWEQIDVLNDSSDGDLAQNLSPDKQEEFARAISLSLEEDDDLESTQSDKEGLTYMTNIKTHLACQDSSYRKLSQKFSLQDEDLARAFVMHLKDNAYYLESQRSDSGYGLETPPSNTASEEEASRKFILGSDEMAQVITIAVRMPDGRRLARCFRKTQTFQDLFNFVDNVGFRAKESRNYR 1041
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02238 1041 MobiDBLite consensus disorder prediction 402 430 - -
Pste6g02238 1041 MobiDBLite consensus disorder prediction 964 982 - -
Pste6g02238 1041 CDD UBA_Ubx1_like 202 238 - -
Pste6g02238 1041 PANTHER FAS-ASSOCIATED PROTEIN 942 1041 - -
Pste6g02238 1041 Pfam UBX domain 996 1036 IPR001012 GO:0005515
Pste6g02238 1041 CDD UBX 660 702 - -
Pste6g02238 1041 SUPERFAMILY Ubiquitin-like 996 1033 IPR029071 -
Pste6g02238 1041 Pfam UBA-like domain 204 242 - -
Pste6g02238 1041 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 433 452 IPR003903 -
Pste6g02238 1041 Gene3D - 995 1041 - -
Pste6g02238 1041 Gene3D - 655 686 - -
Pste6g02238 1041 MobiDBLite consensus disorder prediction 964 983 - -
Pste6g02238 1041 Pfam Ubiquitin interaction motif 113 127 IPR003903 -
Pste6g02238 1041 Pfam Ubiquitin interaction motif 887 899 IPR003903 -
Pste6g02238 1041 Pfam Ubiquitin interaction motif 433 447 IPR003903 -
Pste6g02238 1041 Pfam Ubiquitin interaction motif 391 405 IPR003903 -
Pste6g02238 1041 Coils Coil 614 634 - -
Pste6g02238 1041 ProSiteProfiles UBX domain profile. 993 1041 IPR001012 GO:0005515
Pste6g02238 1041 SMART uim 433 452 IPR003903 -
Pste6g02238 1041 SMART uim 112 131 IPR003903 -
Pste6g02238 1041 SMART uim 884 903 IPR003903 -
Pste6g02238 1041 SMART uim 390 409 IPR003903 -
Pste6g02238 1041 CDD UBX 999 1037 - -
Pste6g02238 1041 ProSiteProfiles UBX domain profile. 654 682 IPR001012 GO:0005515
Pste6g02238 1041 MobiDBLite consensus disorder prediction 414 430 - -
Pste6g02238 1041 SUPERFAMILY Ubiquitin-like 653 702 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02238 Pste-Chr6 10679142 10700253 Wgd