Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02230 AGACAGCATTTTTTTTCTCCGCTACAGAGAGAAAGCTGAGACATTGGGGCTTTATCCTTTTGTCTCCTCTATCTCTCTGTCTCTATTCTTTTTCCCACTTTACCTTGAAAGTTTCCTCTTTGATCGCTCTCCCGAGTATATAAGCCTGTTCCTGACCTACCCAGTTCATCTTTTGAGTCTCTCTTTGGTATAAAAAATCTGGGGTGGTAAATTGACACTCAAATTGTCACGGATGAAGCAAATCGGTGCATAAGAAGAAAAAGTGAGTTTAAGGGCAAAGCTTTTGGCTTGTAGAGGTGCTTTTGTTAAAGAGAAAAGTGGCTTCTTTGATGAGTTTTGGGGGTCTTTTAGACAACAAGTCAGGTAGTGGCGGTGCCAGAAACCACGTTTCAGATATTCCTTACAATAACAACGTTACCACCACCAACAACAACAACGATAGAATGCCCTTTGGTGCAATCTCTCAGCCACGCCTCCTGACCACTACTCCCACTTTGGCCAAATCTATGTTCAACTCTCCAGGACTATCTCTGGCACTTCAAACCAATATAGATGGACAGGAAGATGTGAATAGAATGACTGAGAATAACTTCGAACCAAACGGTTTGAGAAGAAGCAGAGAAGAAGAACATGAAAGCAGATCTGGTAGCGACAACATGGACGGCGCTTCCGGCGATGAACACGACGCAGCCGACAACCCTCCGAGAAAAAAACGCTATCACCGACATACCCCTCAGCAGATACAAGAACTTGAAGCGTTGTTCAAGGAGTGTCCTCATCCAGATGAAAAGCAAAGACTGGAACTGAGCAAAAGGCTGTGCTTGGAAACTCGACAAGTGAAATTTTGGTTCCAAAATCGGAGAACCCAAATGAAGGTGTGTCACGGACTTGCGCTCCAAACTCTGATCAAGTCATTTTCACAACAAACTTGTTTTCTTGTTTTTGAGAATGAAACTTTTTCTCCTTTCTCCTTTTCGTGGTTTTGTGTATTGTACGATATGTACTACAAACCAAACCAGACCCAGTTGGAGCGGCACGAAAACACTTTGCTGAGGCAAGAGAACGACAAGCTGAGAGCGGAGAACATGTCGATAAGGGACGCAATGAGGAACCCCATGTGCTCCAATTGCGGTGGCCCAGCCATCATCGGGGAGATTTCGCTGGAGGAGCAGCACCTTCGGATTGAGAACGCGCGTTTGAAAGACGAACTTGATCGCGTGTGTGCACTCGCGGGAAAGTTCTTGGGTCGCCCCGTTTCTTCGTTACCCAACTCAAGTTTGGAGCTTGGAGTTGGCGGTAACGGGTTTGGAGCAATGACCACTATGCCCGCGACAACATTACCTTTGGGACAAGATTTCGTGATGGGAATGTCTATGTCGAATAATCCGCTGGCTATGATGTCTCCTCCGAGTACTAGGCCAACAACTGTTGTCACCGGGTATGATAGGTCTATGGAGAGGTCTATGTTTCTTGAGCTTGCTTTAGCTGCCATGGATGAGTTGGTGAAGATGGCGCAGACTGGGGAGCCTCTTTGGATGAGGAATGTTGAAGGTGGGAGGGAAATTTTGAACCATGAGGACTACGTCAGGACTTTCACTCCTTGCATTGGTTTGAGACCCAATGCCTTTGTTTCTGAGGCCTCCAGGGAGAATGGAATGGTTATCATTAACAGCTTGGCACTTGTTGAGACTCTTATGGACTCGAATCGATGGGCAGAGATGTTCCCTTGTATCATTGCCAGAACGTCAACCACTGAAGTCATATCTAATGGGATAAACGGAACAAGAAATGGAGCACTTCAATTAATGCATGCTGAACTTCAAGTTCTTTCGCCTTTGGTGCCTGTTCGTGAGGTTAATTTCCTACGGTTTTGCAAGCAGCACGCAGAGGGGGTATGGGCTGTGGTGGATGTGTCCATAGATAGCATCCGTGAAAGTTCTGGAGCTCCCACTTTTGTTAACTGTAGGAGGCTTCCTTCTGGTTGTGTGGTGCAAGATATGCCCAATGGTTACTCCAAGGTGACATGGGTGGAGCATGCAGAATATGATGAAAGCCAAGTTCACCAGCTGTATAGACCATTGTTGAGCTCAGGCATGGGGTTTGGTGCCCAACGTTGGGTAGCTACCCTTCAACGCCAATGCGAGTGCCTTGCCATCTTAATGTCCTCAGCAGCACCCTCTCGAGACCATTCCGCAATAACAGCGGGGGGAAGGCGCAGCATGGTGAAGCTGGCGCAGAGGATGACGAACAATTTCTGCGCGGGTGTGTGCGCGTCGACGGTGCACAAGTGGAACAAGTTGAACGCAGGGAACGTGGACGAGGACGTGAGGGTGATGACGCGGAAGAGCGTGGACGACCCGGGAGAGCCACCGGGGATCGTCCTCAGCGCCGCCACCTCCGTCTGGCTCCCCGTCTCCCCCCACAGACTCTTCGACTTCCTCCGCGACGAGCGCCTCCGAAGCGAGTGGGACATTCTCTCCAACGGTGGTCCCATGCAGGAGATGGCCCACATCGCCAAGGGCCAAGACCATGGCAACTGCGTCTCCCTTCTTAGAGCCAGTGCGATAAATTCCAACCAGAGTAGCATGCTGATACTTCAGGAAACAAGCATAGACGCGGCGGGATCGCTTGTGGTCTACGCGCCGGTTGACATCCCAGCCATGCACGTGGTTATGAATGGTGGGGATTCGGCTTACGTGGCGTTGTTACCTTCGGGCTTTGCAATTGTCCCTGATGGGCCTGGTTCTCGTGGGCCACAGAACGGGCCCACTACCACAGCAAACGGTGGTGATAGCACGACGACGCGTGTGAGTGGGTCCCTCCTAACCGTGGCGTTTCAGATCCTTGTGAATAGTCTCCCTACGGCAAAGCTCACTGTAGAATCCGTGGAAACCGTGAACAACCTCATCTCCTGCACCGTTCAGAAAATCAAAGCAGCACTCCACTGCGAAAGTTAACCGTCACGTGATTGTCATCACCAGATCACGTGAGTCTGGTTTTTTTTTTTTTTTTATTGAGGTTCTTGTTCAAAATTAACGTTGTAGCTGATGGATGTTTACCGTGTAATGGTGGCACGTTTGAAAGACGCGGGTTGCGTGAGTCAAGAACGAACCGTGCGTGGGGAAAAAACAGAAAACTCCTTGCATGGTGGTAAGGATCAGAAAGAGGTCGTGTTAGGATCCTTAACACAAGGCAAGGATCGTGGTTCGGGTATTGACTCGGGTTGACCTCGACTACAAGTAAACAACAGAGGAATGCATAAAATATAACAAAAATGAAAAAAAATAATTTTGTAGGTATTTATTAGTAAAAATGTTATTTTAACTTGTATTGATTGGATTGGTGGAATTGTAGTTTTAAGTTTGGTCTAGGAAATGTAGTTTTCTATTAGTAGATATGGTTGACAGAGAAAGTATTTTATTGTAGGGAATCCC 3434 0.4796 MSFGGLLDNKSGSGGARNHVSDIPYNNNVTTTNNNNDRMPFGAISQPRLLTTTPTLAKSMFNSPGLSLALQTNIDGQEDVNRMTENNFEPNGLRRSREEEHESRSGSDNMDGASGDEHDAADNPPRKKRYHRHTPQQIQELEALFKECPHPDEKQRLELSKRLCLETRQVKFWFQNRRTQMKVCHGLALQTLIKSFSQQTCFLVFENETFSPFSFSWFCVLYDMYYKPNQTQLERHENTLLRQENDKLRAENMSIRDAMRNPMCSNCGGPAIIGEISLEEQHLRIENARLKDELDRVCALAGKFLGRPVSSLPNSSLELGVGGNGFGAMTTMPATTLPLGQDFVMGMSMSNNPLAMMSPPSTRPTTVVTGYDRSMERSMFLELALAAMDELVKMAQTGEPLWMRNVEGGREILNHEDYVRTFTPCIGLRPNAFVSEASRENGMVIINSLALVETLMDSNRWAEMFPCIIARTSTTEVISNGINGTRNGALQLMHAELQVLSPLVPVREVNFLRFCKQHAEGVWAVVDVSIDSIRESSGAPTFVNCRRLPSGCVVQDMPNGYSKVTWVEHAEYDESQVHQLYRPLLSSGMGFGAQRWVATLQRQCECLAILMSSAAPSRDHSAITAGGRRSMVKLAQRMTNNFCAGVCASTVHKWNKLNAGNVDEDVRVMTRKSVDDPGEPPGIVLSAATSVWLPVSPHRLFDFLRDERLRSEWDILSNGGPMQEMAHIAKGQDHGNCVSLLRASAINSNQSSMLILQETSIDAAGSLVVYAPVDIPAMHVVMNGGDSAYVALLPSGFAIVPDGPGSRGPQNGPTTTANGGDSTTTRVSGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAALHCES 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02230 875 SUPERFAMILY Homeodomain-like 110 182 IPR009057 -
Pste6g02230 875 SMART START_1 382 606 IPR002913 GO:0008289
Pste6g02230 875 ProSiteProfiles 'Homeobox' domain profile. 124 184 IPR001356 GO:0003677
Pste6g02230 875 Gene3D - 450 603 IPR023393 -
Pste6g02230 875 MobiDBLite consensus disorder prediction 91 126 - -
Pste6g02230 875 ProSitePatterns 'Homeobox' domain signature. 159 182 IPR017970 GO:0000981|GO:0006355
Pste6g02230 875 MobiDBLite consensus disorder prediction 802 823 - -
Pste6g02230 875 Gene3D - 113 191 - -
Pste6g02230 875 ProSiteProfiles START domain profile. 373 609 IPR002913 GO:0008289
Pste6g02230 875 MobiDBLite consensus disorder prediction 808 823 - -
Pste6g02230 875 Pfam Homeodomain 127 182 IPR001356 GO:0003677
Pste6g02230 875 MobiDBLite consensus disorder prediction 14 40 - -
Pste6g02230 875 CDD START_ArGLABRA2_like 377 605 - -
Pste6g02230 875 SUPERFAMILY Bet v1-like 374 606 - -
Pste6g02230 875 CDD homeodomain 126 182 IPR001356 GO:0003677
Pste6g02230 875 MobiDBLite consensus disorder prediction 77 134 - -
Pste6g02230 875 SUPERFAMILY Bet v1-like 633 868 - -
Pste6g02230 875 Coils Coil 233 258 - -
Pste6g02230 875 FunFam Homeobox-leucine zipper protein HDG1 114 198 - -
Pste6g02230 875 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 123 872 IPR042160 -
Pste6g02230 875 SMART HOX_1 125 188 IPR001356 GO:0003677
Pste6g02230 875 Pfam START domain 382 606 IPR002913 GO:0008289
Pste6g02230 875 MobiDBLite consensus disorder prediction 1 40 - -
Pste6g02230 875 FunFam Homeobox-leucine zipper protein GLABRA 2 382 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02230 Pste-Chr6 10614670 10621648 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02230 1 875 Homeobox Transcription Factor Family AT3G61150 62.050 0.0 1026
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Pste6g02230 START 4.4e-58 CL0209