Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02229 atgaagaacttatactggtttaaagaaatttctaacaacgtgagatcagggagaagactttctctaggtgaatacaagagagcagtgtcatggtccaagtatttggtctcttccggggcagccataaagggagaggcagaagaagaatggagtgctgatttgtctcagttgttcattggttccaagtttgcttctggcaggcatagcagaatctacagaggcatctacaaacacatggatgttgcaatcaagctggtgagtcaacctgaggaagatgaagacttggctgttttgctagagaagcaattcacttctgaggttgctttgctctttcgcttgcgccatccaaatatcattacttttgttgcagcttgcaagaaacctcctgtcttctgtataattactgaatatttggctgggggttccttgagaaagttcttggttcagcaagggccacattcagttcctcacaaacttgttctgaaattggccctagacattgcacggggaatgcaatatcttcattctcagggcatacttcacagggacctcaaatcagaaaatctacttctgggggaagatttgtgtgtaaaagtagcagattttgggatctcatgcttggaatctcagacaggcagtgcaaaaggattcactggaacataccgttggatggcacctgaaatgatcaaagaaaagcgtcacaccaagaaagtagatatctatagttttgccatagttctatgggaactcctaacagggttgacgccatttgacaacatgacaccagagcaagcagcatatgctgtgactcacaagaatgagaggcctccgttaccatgtgagtgtccacgggcatttagtcatctcatcaatagatgctggtcaagcaatgcagataaaaggccacattttgatgagatagtctcaattttggagagctatactgaagcacttgagcatgatccagaatttttatccacttacaaaccacgtcctaataatataattctcagatgcttaccaaaatgttatactgccaatatatctgcttcttgcaaagctcagcattctcttcccatataa 1083 0.0 MKNLYWFKEISNNVRSGRRLSLGEYKRAVSWSKYLVSSGAAIKGEAEEEWSADLSQLFIGSKFASGRHSRIYRGIYKHMDVAIKLVSQPEEDEDLAVLLEKQFTSEVALLFRLRHPNIITFVAACKKPPVFCIITEYLAGGSLRKFLVQQGPHSVPHKLVLKLALDIARGMQYLHSQGILHRDLKSENLLLGEDLCVKVADFGISCLESQTGSAKGFTGTYRWMAPEMIKEKRHTKKVDIYSFAIVLWELLTGLTPFDNMTPEQAAYAVTHKNERPPLPCECPRAFSHLINRCWSSNADKRPHFDEIVSILESYTEALEHDPEFLSTYKPRPNNIILRCLPKCYTANISASCKAQHSLPI 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02229 360 Pfam Protein tyrosine and serine/threonine kinase 59 311 IPR001245 GO:0004672|GO:0006468
Pste6g02229 360 Gene3D Phosphorylase Kinase; domain 1 46 138 - -
Pste6g02229 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Pste6g02229 360 FunFam Serine/threonine-protein kinase isoform 1 47 139 - -
Pste6g02229 360 Gene3D Transferase(Phosphotransferase) domain 1 140 335 - -
Pste6g02229 360 CDD STKc_MAP3K-like 64 311 - -
Pste6g02229 360 SUPERFAMILY Protein kinase-like (PK-like) 45 311 IPR011009 -
Pste6g02229 360 ProSiteProfiles Protein kinase domain profile. 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02229 360 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672|GO:0006468
Pste6g02229 360 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672|GO:0006468
Pste6g02229 360 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672|GO:0006468
Pste6g02229 360 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672|GO:0006468
Pste6g02229 360 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672|GO:0006468
Pste6g02229 360 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 50 314 - -
Pste6g02229 360 SMART serkin_6 57 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02229 Pste-Chr6 10614607 10617402 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02229 30 320 MAP Kinase Kinase Kinase AT1G62400 63.390 4.49e-134 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Pste6g02229 PK_Tyr_Ser-Thr 1.2e-63 CL0016