Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02220 GTTTGTAACTGTTGTTTCTTCCTTTGTTTCCTCGGCATTTCATATCTAACTCCCAACCCCTTAATAAACCCTCGACGCTCTTCCAACCCCTTCATCCCAAACATTCAGTTATACACTCTCACACCACAAGTTATGCCTATGCACACTGAAATGCTCGTAGCAAAAGCAGAAGCACGCAAATTAGAGATAAGTCTGATATCGGGAGAAAACATAAACGGGGCGGAAAAGGTGTATGTTGTTGTTCGTGCTGAGTCTCTCAATTGCTGCACCACCAAAATGGTGAATGAAAATAAGGGAGTGCATGCATGGAACGAGAAATTCACGTTAGACGTTCCTCCACATGCAAGGTCAGTTACATTTGAGGTTCAAAGCAACAAGTATAAAGGGTTTCGCCCTATTGGGGTAGCCAGGATAGCACTTTCAGATTTTCTTAGTGCCACTGCCAATAATAATATTGGGCCTGCGCCTCAAACGTTCTGTTACGGGTTGAGAAATTGGGAGGGTCGACGAAACGGGGTTATTCATTTCTCCGTCAAGGAGGTCACACAACCGGATAATTTGTGTTTAGCCACAAAACAAGAAAATGACATAGCCAAGGTGAGTCCTGTCACAGGAATTCAGCAACAAGTTATGGTGGACCAGAATAATCCAGTTTGGTGGAGTTTCCAAATTGTGATAGATATGGAGGCAAAACCACATGCACAAACCTTAGAAATCACCGTTAGATGTGGAGAAAACATAAGCGTGGATCAACGGTTAGGAGCGGAGAACGTATATGTTGTTGTTCGTGCCGAGTCTCCGAATTGTTGCACGACCAAAATGGTGAATGAAAATGGAGGAGTGCATGCATGGAATGAGAAGTTTTTGTTAGAAGTTCCTTCACATGCAAGGTCAGTTACGTTTGAAGTGCAATGCAAGAAGTATAAAGGGGTTCGCCCTATTGGGGTAGCAAGGATTGCACTTTCAGATTTGGTTAGTAGCAATAATAATGCTGTGTCGGACAACGTTCCTCAAATGTTGTGTTACGGGTTGAGGAATTGGGAAGGTCGACGAAACGGGGTTATTCATTTCTCCGTCAAAGAGGCGACACAAACAGAGGATAACTTGTGTTCACAAACAAAACAAGCAAAAGACATAACCACATGTGAACGCAGTGAGCATGAGGTAATGGGAATTCAGGTGGACCAGCATAAATTAAGTCCTGTTGTGATTGGCATTCCAGTTTCATGGAGCTACCAAATTTGA 1245 0.4329 VCNCCFFLCFLGISYLTPNPLINPRRSSNPFIPNIQLYTLTPQVMPMHTEMLVAKAEARKLEISLISGENINGAEKVYVVVRAESLNCCTTKMVNENKGVHAWNEKFTLDVPPHARSVTFEVQSNKYKGFRPIGVARIALSDFLSATANNNIGPAPQTFCYGLRNWEGRRNGVIHFSVKEVTQPDNLCLATKQENDIAKVSPVTGIQQQVMVDQNNPVWWSFQIVIDMEAKPHAQTLEITVRCGENISVDQRLGAENVYVVVRAESPNCCTTKMVNENGGVHAWNEKFLLEVPSHARSVTFEVQCKKYKGVRPIGVARIALSDLVSSNNNAVSDNVPQMLCYGLRNWEGRRNGVIHFSVKEATQTEDNLCSQTKQAKDITTCERSEHEVMGIQVDQHKLSPVVIGIPVSWSYQI 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02220 414 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 59 181 IPR035892 -
Pste6g02220 414 PANTHER INGRESSION PROTEIN FIC1 233 361 - -
Pste6g02220 414 Gene3D C2 domain 54 209 IPR035892 -
Pste6g02220 414 SMART C2_3c 236 333 IPR000008 -
Pste6g02220 414 SMART C2_3c 60 152 IPR000008 -
Pste6g02220 414 Pfam C2 domain 61 147 IPR000008 -
Pste6g02220 414 Pfam C2 domain 236 329 IPR000008 -
Pste6g02220 414 CDD C2_SRC2_like 236 357 IPR044750 GO:0006952
Pste6g02220 414 ProSiteProfiles C2 domain profile. 220 334 IPR000008 -
Pste6g02220 414 Gene3D C2 domain 232 360 IPR035892 -
Pste6g02220 414 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 228 360 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02220 Pste-Chr6 10549390 10559422 Proximal