Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste6g02215 | ATGATGGCATCAAGAAGTGTGGAGATTACAATTTTGTCAGCAGAAAACCTCCAAATGAACAAAAGAGCCATAAGAGGGAACGCTTTTGTGACGGTAAAATCGGACGCAAGCAGCAACACAAGTGCGACGAGAGTGGATTCGGAAGGAGGGAGTTACCCATCGTGGAACGAGAAAGTGGTGATGGACGTGCCGTTCCATGCAAGGTTCATAACAGTTGAAGTGAAGTGCAAGACATCATCGACGGGGTCGAACAGTGTCGGCGTGGCAAGAATACCAGTGTCTGATTTCATCGGAGGGTACGTGCCCGATAATCAATTGCATTTTTTAAGCTACAGGTTATGGGACGGCAAAGTTAGGAGAAACGGTGTTGTAAATATTTCGGTGAGGGTCAAAGTGGCGGAACATCATTCCAATTCTACCCCGTTGCCGCCGCCTGTAACCGGAGTGCCGCTTCCCTCTCATCCATCCACCGGACTTGTCACCGGGATTCCCGCTCTTTGGTTGAACTACCAAACTAATTCATCTTTCTAG | 531 | 0.484 | MMASRSVEITILSAENLQMNKRAIRGNAFVTVKSDASSNTSATRVDSEGGSYPSWNEKVVMDVPFHARFITVEVKCKTSSTGSNSVGVARIPVSDFIGGYVPDNQLHFLSYRLWDGKVRRNGVVNISVRVKVAEHHSNSTPLPPPVTGVPLPSHPSTGLVTGIPALWLNYQTNSSF | 176 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste6g02215 | 176 | ProSiteProfiles | C2 domain profile. | 1 | 107 | IPR000008 | - | |
| Pste6g02215 | 176 | SMART | C2_3c | 6 | 105 | IPR000008 | - | |
| Pste6g02215 | 176 | PANTHER | INGRESSION PROTEIN FIC1 | 3 | 145 | - | - | |
| Pste6g02215 | 176 | Pfam | C2 domain | 7 | 100 | IPR000008 | - | |
| Pste6g02215 | 176 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 7 | 132 | IPR035892 | - | |
| Pste6g02215 | 176 | CDD | C2_SRC2_like | 6 | 126 | IPR044750 | GO:0006952 | |
| Pste6g02215 | 176 | Gene3D | C2 domain | 5 | 131 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste6g02215 | Pste-Chr6 | 10497075 | 10497605 | Dispersed/Proximal |