Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02150 atggcaaaatttgtgtacatggttagatgtgtaatgctaatatggtggtggttattaaccccacgtgtgggttccttgaagtggaaggggatagaagaaagcggtctgatttgcgggagtagtgagaaccctggagcgagcgcaccgaagttgatggccataatggacacagtgtggtttcaagtgaaagagagagggtggggagcacaggccctactgggctcggggcctccgatgtacgcattgggccaatgcctgcacgaccttaggcccacggaatgctacacgtgtttcagcgaagccaggcaagtgctatcgcggtgtgtgcctaagacagcaggcagaatttatctggacggctgcttcctccgttacgacaactactcgttctttggcgagagcgtggaccccacacaggacatcaacatatgccagctgtccactctcgggaaagacggggaccgacgggtgaaggcggtgctgtccaacgtcaccaagcgcgccacggagcatgccttcgcggtggacggagaagagggggtttttgccttggcgcagtgctgggcaacactggatcaaggcacttgtcagagatgcttgagagaagccgccaacaaactgcaccaatgtctgcctaatgctgagggtaaatgtctcttcactggttgctttttgaggttttcaacacgcaaattctacaatgacgataccctactacatgacatcaacatcaaccattccaatgtaagcgacagctgtggtgctttacctggttttacctacgtagctggatttagttttaggtacaatacgcttgagaaggctacaaattattttgatcccgcaaacaaattaggccagaacggagctagttccgtattcaaaggaatgctcccctcagggaggaccgttgctattaaacgactatcttttaatacacgacaatggacagctgagttcttcaatgaggtcaatttgattaatgggattcagcacaagaatgtagtggaacttttcgggtgcagctttgaaggtcctgaaagcctattggtttatgaatttgtgcccaatggaagtcttgatcaagtcctttttagcaaagactcagaaaaagctctaaattgggaacaacgatttcaaatcatatgtggaatagctgagggcttagcataccttcatggaggctctggaacaaagattattcacagagacataaagtgcagcaacattctatttgatgagaatcttaatccaaaaatagttgattttggtcttgctcgttgtgttgctggtaacaaatctcattttaacaccgaaaatacagggacactgagatacatggctcccgagtatgttatcgaaggacaattgacagagaaagcagatatttatgcctttggtgtgttagctgttgaaattgtctgtggcaaaaagaacagtgattgcgtcccagggttcacttcagtactctacaatgtgtggaagaattacaatgcaaataatatcacaacatccgttgatcctgctctacatggaaaatttacggtagaagaggcatcgaatgcgctccaagtgggcctcctttgtactcaatcttcttttaatcttagaccatccatgtctgaagtagttcagatgctaaccaacacagactatgttattccctccccagagcaacaaccattcctcaatttcagtggactaagccaaaatgaccgaaccataagttccacaacaagcattttatccgcgaattggcgtgcaagtgcaaggtcctccttccacagcaccaccagctccctgattccaaatgatgatttaacagcactagagaatgccttttctcctgcccagtttgcctctatggggagctctgattaa 1881 0.0 MAKFVYMVRCVMLIWWWLLTPRVGSLKWKGIEESGLICGSSENPGASAPKLMAIMDTVWFQVKERGWGAQALLGSGPPMYALGQCLHDLRPTECYTCFSEARQVLSRCVPKTAGRIYLDGCFLRYDNYSFFGESVDPTQDINICQLSTLGKDGDRRVKAVLSNVTKRATEHAFAVDGEEGVFALAQCWATLDQGTCQRCLREAANKLHQCLPNAEGKCLFTGCFLRFSTRKFYNDDTLLHDININHSNVSDSCGALPGFTYVAGFSFRYNTLEKATNYFDPANKLGQNGASSVFKGMLPSGRTVAIKRLSFNTRQWTAEFFNEVNLINGIQHKNVVELFGCSFEGPESLLVYEFVPNGSLDQVLFSKDSEKALNWEQRFQIICGIAEGLAYLHGGSGTKIIHRDIKCSNILFDENLNPKIVDFGLARCVAGNKSHFNTENTGTLRYMAPEYVIEGQLTEKADIYAFGVLAVEIVCGKKNSDCVPGFTSVLYNVWKNYNANNITTSVDPALHGKFTVEEASNALQVGLLCTQSSFNLRPSMSEVVQMLTNTDYVIPSPEQQPFLNFSGLSQNDRTISSTTSILSANWRASARSSFHSTTSSLIPNDDLTALENAFSPAQFASMGSSD 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02150 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 400 412 IPR008271 GO:0004672|GO:0006468
Pste6g02150 626 ProSiteProfiles Gnk2-homologous domain profile. 29 130 IPR002902 -
Pste6g02150 626 FunFam Cysteine-rich receptor-like protein kinase 2 355 555 - -
Pste6g02150 626 Gene3D Phosphorylase Kinase; domain 1 262 354 - -
Pste6g02150 626 SUPERFAMILY Protein kinase-like (PK-like) 265 565 IPR011009 -
Pste6g02150 626 ProSiteProfiles Gnk2-homologous domain profile. 131 232 IPR002902 -
Pste6g02150 626 ProSiteProfiles Protein kinase domain profile. 279 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02150 626 SMART serkin_6 279 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02150 626 Gene3D - 46 130 IPR038408 -
Pste6g02150 626 Gene3D - 146 232 IPR038408 -
Pste6g02150 626 FunFam Cysteine-rich receptor-like protein kinase 2 250 354 - -
Pste6g02150 626 Gene3D Transferase(Phosphotransferase) domain 1 355 556 - -
Pste6g02150 626 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 79 572 - -
Pste6g02150 626 Pfam Protein kinase domain 282 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02150 626 Pfam Salt stress response/antifungal 156 229 IPR002902 -
Pste6g02150 626 Pfam Salt stress response/antifungal 74 128 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02150 Pste-Chr6 10187950 10191554 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02150 42 564 Receptor kinase-like Gene Family AT1G70520 41.207 4.45e-141 423
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pste6g02150 Pkinase 1.3e-42 CL0016