Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02103 ATGAAAGTGATCAGATTCAGAACACAGCGGGGAAGTGACAGTGTCTTCTTTTCCTGCAGTTTTGATGACATTTTAAGGCCTATACTAGAATGGCCAACAACGGGGGTACTCCAAAGCATGAGAAGATGCAGAAAAACCTTTGCACACAGCTAGCTGTTGCAGTGAGAAGTATTCAGTGGAGTTATGGAATTTTCTGGTCACCTTCAGTCACAGAAGAAAGGGTACTGGAATGGAGGGAAGGATACTATAATGGAGACATTAAGACAAGAAAAACAGTGCAAAGCATGGAATTAGAAATGAAGGCAGATAAAATAGGCCTGCAGAGGAGTGAGCAACTGAAGGAACTATACAAGTTTCTTCTTGCAGGTGAAGCTGATCCTCAAACTAAAAGGCCTTCAGCTGCACTTGCTCCAGAGGACCTCTCAGATTTAGAGTGGTATTACTTGGTTTGCATGTCCTTTGTTTTCAATCACAACCAAAGATTTGGTTTTGTTTGTCTCACCGTGGAAGATTTTTCTTTCGTTTTTAGTAGCTTGCCTGGAAGAGCACTAGATATCAGTGACACTGTCTGGTTATGCAATGCTCAACATGCGGATAGCAAAATTTTCTCTCGTTCTTTGCTAGCAAAGACCGTGGTGTGTTTTCCCTATCAGAAAGGCGTTATTGAGATAGGCACAACTGAACTGGTAGCATTTGTGTTCTTCTGCCAAAAGCTGGTTACTGAGGATCCTAGTCTCATTCAACATGTCAAGGCTTGCTTCTTAGAAATCTCAAAGCCTACATGCTCTGATAAATCTTCCTCTGTCCTTGATAAGCCACATGATGACAAATATCCAACATGCACCAAAGGTGACCACAGGATGTTAGATACAATGGCTTTGGAGAAACCATGTTCCCTTGAAGAAAAAATAAAATTTGATCGTGATCCCATCAAGGAATTACAAGATGATAACAATGAAGATTCTAACATGGACTCTCCTGATGGTTGTGAGCATAATTTCCACATAAATGGATCCATGATTGAGGGTATCAATGGTGTGGCTTCTAGAGTTCATTTTGTGAATAATACCTTAGTCATTGGTGCTCCAGATTCCCTGAGTTCTTGTGATTGTATGTCTGAAGCTTCTGAGAACCAAGGCAAGGACTCCAAGAATGCGCAAGTTCAAGATTGCTATAAACCAAAGAGAAGCTCATTGGATGCTGGAGCTGATGAAGATTTGTGCTACATAAAAACACTTTGTTCTATTTTGGGAAGTTCATCAACATTTAAACCAAACCTTTGTGCTGGTAAGTCAAATTGCAAATCTAGTTTTGCAAAATGGAAGAAAGGGAGAGTTTCTGAAAGGAAGAGGACGAAGTTTCACCAAAGCATGTTAAAGAAGACTTTGTTTAAGGTCCCCTTTATGTACAGAAGTTGTTGCCCTTCTCTTAAGTCACAAAAAGAGAATGACAGAATGGAATGGACTAGTAAATTCGAAAATGCTGATGATGGTTTCATGGGGAAAGCATTCTCTGATAAGAAAAGAGAAATAAAAAACTTTCAGGTTGTCAAATCTTTGGTTCCATCTTCTATTAGTGAGGTGGAGAAGATTTCCATTCTTGGAGACACAATTAAGTACTTGAAAAAGCTTGAGACAAGAGTGGAAGAGCTAGAATCTTACATGGAAGTTTCAGATCCTGAAGCAAGAACCAGAAGAAAATGCCCTGATGTTCTAGAGCAGATGTCAGATAACTATGGCACCAGAAAGATTTGCATGGGAATGAAACCTTGGACCAAAAAAAGGAAGGCTTGTGGCATTGATGAGATAGACACAGAGCTAGAAAGAATTGTTTCTGAAGAAGCAAAGGCATTGGATGTGAAAGTCAATGTGAAGGAACAAGACGTTCTGATTGAGATGAAATGTCCTTACAGGGAATACATACTATATGATATCATGGAAACCATTAACAGCCTACATTTAGATGCTCACACAGTTGAATCATCAACAAGTGATGGTATTCTCACATTGACACTTAAATCTAAGTTTCGAGGAGTAGCAACAGCACCAATGAGGATGATCAAAGAAGCACTCTGGAAAGTATCTGGAAATATTTGACATGCCTGCTTGGATTTCTCATGATAATAGTAGTAACAGTAAATAGTCAGATTAAGCAACTTTAGCTATAACTAGAACAGTAATTTGTTAGCAAAACATGTATGTCTTGTTGTATGAACCATGATTTTGGCTATTGTACTTGTATTTGTATACTGTCTTGTTAGAGTTACCAGAGTTCCATTCTGTAAGTTTAAATCAATTAAGCCATTTGTTTGCTGTTACTGCCAA 2324 0.389 MANNGGTPKHEKMQKNLCTQLAVAVRSIQWSYGIFWSPSVTEERVLEWREGYYNGDIKTRKTVQSMELEMKADKIGLQRSEQLKELYKFLLAGEADPQTKRPSAALAPEDLSDLEWYYLVCMSFVFNHNQRFGFVCLTVEDFSFVFSSLPGRALDISDTVWLCNAQHADSKIFSRSLLAKTVVCFPYQKGVIEIGTTELVAFVFFCQKLVTEDPSLIQHVKACFLEISKPTCSDKSSSVLDKPHDDKYPTCTKGDHRMLDTMALEKPCSLEEKIKFDRDPIKELQDDNNEDSNMDSPDGCEHNFHINGSMIEGINGVASRVHFVNNTLVIGAPDSLSSCDCMSEASENQGKDSKNAQVQDCYKPKRSSLDAGADEDLCYIKTLCSILGSSSTFKPNLCAGKSNCKSSFAKWKKGRVSERKRTKFHQSMLKKTLFKVPFMYRSCCPSLKSQKENDRMEWTSKFENADDGFMGKAFSDKKREIKNFQVVKSLVPSSISEVEKISILGDTIKYLKKLETRVEELESYMEVSDPEARTRRKCPDVLEQMSDNYGTRKICMGMKPWTKKRKACGIDEIDTELERIVSEEAKALDVKVNVKEQDVLIEMKCPYREYILYDIMETINSLHLDAHTVESSTSDGILTLTLKSKFRGVATAPMRMIKEALWKVSGNI 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02103 668 PANTHER TRANSCRIPTION FACTOR TT8 12 666 - -
Pste6g02103 668 Gene3D - 477 544 IPR036638 GO:0046983
Pste6g02103 668 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 224 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02103 Pste-Chr6 9925064 9931269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02103 6 665 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G63650 35.901 3.41e-107 335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02103 6 9925064 9931269 Pste6g02103 6 9925064 9931269 ECH