Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02077 GAAATTATACTCATTCCTTTTACCGCACCTCATTCCTCTTTACATCTCGGTCAATTCTGATTCCAACAAAGTGAGAAACCCTAGTTTTGGAGGATGGATAGGAAGATCTTATATTCCGAGAAGTACTTCGATGATAACTATGAATACAGACATGTGGTTCTGCCTTTTGAAGTTGCCAAATTGCTTCCCAAGAATCGGCTTCTCGCAGAAAGTGGTTGGCGGAAAATAGGGATTGAGCAGAGCTGTGATTGGGAGCATTACGCAATTCATCTCCCTGAGCCACATATAATGCTTTTCAGGAGGCCTTTGCAAAACCAGGCCCATCGACCCATCCATTCTCAATTTCAAAATCTCACTGTCCAAGACAAATAATATTATGTGCATTTTTAAAGACCTAATTGTGTTTGAATTCTTCTTTTTTTCCCCATTATTTCAACTTTATTGTTCCTACAACTTTTATATATACTTTAGAAC 474 0.384 MDRKILYSEKYFDDNYEYRHVVLPFEVAKLLPKNRLLAESGWRKIGIEQSCDWEHYAIHLPEPHIMLFRRPLQNQAHRPIHSQFQNLTVQDK 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02077 92 Pfam Cyclin-dependent kinase regulatory subunit 5 71 IPR000789 GO:0016538
Pste6g02077 92 SMART CKS_2 4 73 IPR000789 GO:0016538
Pste6g02077 92 SUPERFAMILY Cell cycle regulatory proteins 4 84 IPR036858 GO:0016538
Pste6g02077 92 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 2 78 - -
Pste6g02077 92 Gene3D - 1 77 IPR036858 GO:0016538
Pste6g02077 92 PRINTS Cyclin-dependent kinase regulatory subunit signature 19 33 IPR000789 GO:0016538
Pste6g02077 92 PRINTS Cyclin-dependent kinase regulatory subunit signature 41 55 IPR000789 GO:0016538
Pste6g02077 92 PRINTS Cyclin-dependent kinase regulatory subunit signature 56 70 IPR000789 GO:0016538
Pste6g02077 92 PRINTS Cyclin-dependent kinase regulatory subunit signature 4 18 IPR000789 GO:0016538
Pste6g02077 92 FunFam Cyclin-dependent kinases regulatory subunit 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02077 Pste-Chr6 9777683 9778651 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02077 4 75 Core Cell Cycle Gene Families AT2G27970 75.000 3.78e-36 115