Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02058 ATGGCAGAGTGGTCATTGTTCAACGATGAAGTTCGCATAAGAGACAAAGGCAACATTGTTGGAGGCTCGAATGACGATTCTCGATGTGATTTTGAGAAATTGCTTGCTAAGTTATTGCATGAAATTTGTGGGTTTGATTATTTTCAGTCTTTTCCTGCAATGTTGGGTAATGGGCAACCTATTGATTTGTATAAACTATTTTTAGTTGTGAGAAGGAAAGGTGGATATGATGTTGTTTGTGATAGGAAATTATGGGATATGGTTGGGGAAATGTCTAGCTTGGGTGTCAATGTTGGTCCATCAGTAAAGCTAGTGTATAGTAAGTACTTGAGTGTTCTAGATTCATGGTTGAAAAACATGGTTGAAATTAAGGTGTTCCCTGGGTGTGGTCTGGTAGATGATAGGGAAATATTAAGGAAACGATTGATGGAGTTGCAAGTATTGTCATCTGATTGTATTGAGGATGAGGTGGTGGTTAGAGGTGAGATTAAGCATGGAATTGGTGATGATAACTTGGATACAAAGTTGTGTGATGGTGACAATTATGGTGATACTTTTGACTGTAAAAGGAAGAAAAAGAAGTATATGTTGAATTCATCTAATGGTGATAGTGATAGCCTCAATTGTAAGAGGATGAAAGAGTCTGCTTTGGATATGCTAAGATGGGTTACAAGTGTTGCAAAGAATCCTAATGATCCTAAAGTTGGTTTAATACTTGAAAAGTCAAAGTCAAAGTCTTGCATTAATCAAGAAGGGTGGAAAAAAGTGTTGTTGTTTCGTGAGGCCGCATTTCTCAAAACTTTTGAGACAAGTAATAAACAATATTGGCAGAATCAGAAGATACATCCTTATTTTTATGAAGATCACATTGGGACAAATTATAATCTTAAAGAAAGATTTAAGCATGACAAGAAGCTTTTATTTGGAAAATCAACTTCATCTACTCGAAGCACTTCTAATCCTTTTCTAGGAACTAATAACAAAACATCAGGTCCTCACACCAAAGATCGCTCTAAGAAACGATCTCTTAATTCCTCTTGTGTAAATTTAGGTATTGATAAATGTGCTATAGTGCACATACCTTTGGGGGAAAATCATCAAGCTGAAGTACCAGAATGGATTGGTGTGACTTTTGAAAGTGATTCAAAGTGGTTAGGGACCCAAATGTGGCCTTTGGTAACAGAAAATACCAATCTTATTGAAATGGACCCCATAGGAATGGGAAGGCAAGATTCATGCAATTGTTCAGTACCCGGTTCTGTTGAGTGTGTAAGATTTCACATATCTGAGAAAAGAGAAAAAAATTTTATGGAATTGGGTGCAACATTTTTTGACTGGAATTTTGATCAAGTAGGTGAAGATGTTAAGCTGTTATGGACAAAAAAAGAAGAGGAAACATTTGAAGATGTGGTACGATCAAACCCTTCATCAGCTAAGACATATTTTTGGGACCATATCTTTAGAGCATTTCCTCTTAAGAGCAGGGAAGATTTGGTTAGCTACTATTTCAATGTATTTATTTTGCAACGCAGAGCATACCAAAACAGACATACTCTGGATAACATTGATAGTGATGATGATGGTGAAACTAGAGCCCTGAGGAATGCTTTTGGACATCGGACACAAAATTCTACACATTAG 1641 0.3644 MAEWSLFNDEVRIRDKGNIVGGSNDDSRCDFEKLLAKLLHEICGFDYFQSFPAMLGNGQPIDLYKLFLVVRRKGGYDVVCDRKLWDMVGEMSSLGVNVGPSVKLVYSKYLSVLDSWLKNMVEIKVFPGCGLVDDREILRKRLMELQVLSSDCIEDEVVVRGEIKHGIGDDNLDTKLCDGDNYGDTFDCKRKKKKYMLNSSNGDSDSLNCKRMKESALDMLRWVTSVAKNPNDPKVGLILEKSKSKSCINQEGWKKVLLFREAAFLKTFETSNKQYWQNQKIHPYFYEDHIGTNYNLKERFKHDKKLLFGKSTSSTRSTSNPFLGTNNKTSGPHTKDRSKKRSLNSSCVNLGIDKCAIVHIPLGENHQAEVPEWIGVTFESDSKWLGTQMWPLVTENTNLIEMDPIGMGRQDSCNCSVPGSVECVRFHISEKREKNFMELGATFFDWNFDQVGEDVKLLWTKKEEETFEDVVRSNPSSAKTYFWDHIFRAFPLKSREDLVSYYFNVFILQRRAYQNRHTLDNIDSDDDGETRALRNAFGHRTQNSTH 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02058 546 SMART ARID_2 22 114 - -
Pste6g02058 546 MobiDBLite consensus disorder prediction 311 331 - -
Pste6g02058 546 MobiDBLite consensus disorder prediction 311 342 - -
Pste6g02058 546 SMART bright_3 26 119 IPR001606 GO:0003677
Pste6g02058 546 Pfam ARID/BRIGHT DNA binding domain 49 111 IPR001606 GO:0003677
Pste6g02058 546 ProSiteProfiles ARID domain profile. 25 118 IPR001606 GO:0003677
Pste6g02058 546 CDD SANT 459 506 IPR001005 -
Pste6g02058 546 SUPERFAMILY ARID-like 50 120 IPR036431 GO:0003677
Pste6g02058 546 CDD ARID 30 110 - -
Pste6g02058 546 Gene3D - 21 125 IPR036431 GO:0003677
Pste6g02058 546 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2 24 531 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02058 Pste-Chr6 9663470 9666523 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR ARID Pste6g02058 ARID 5.4e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g01364 5 8808216 8814818 Pste6g02058 6 9663470 9666523 PCT