Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02050 AAAAGAGGCACCGAAAAAGAGATGACATCACATTCACGGCGCATAATAGCGTCACCAACCATTTATTACAAAACAAGATAGCAAGTCTTACTTCAGTTCAGTTGACTCTCTCTCTCTAACACCAACCCGCCATTTTTCCATCTCACTCTAAAACACACCACACAATACCTATGACTTCGCCTTATACCAACCACCACCGATCTAGCTCCGACCACCGCAGCACGCGCTCCAAAGTTCCGACCTCCCCTTATGCCTCATCCGAGCTCACCACCTCCACCGTCTCCTCCCGCCGCAACCCCGTCTCCGCCGCCGCCAAGTCCTTCGCCGGAATTTTCGCCGGCTGCTTCACGCCGCCGGACCCCGTCAGCTCCAAGAGCCTCGGGGATTCCGAGGAGTTCAAGTCTTCTTCCACTGTATCGAATGCTTCAAGAAGTGGTAGTCAGAGGGGGCGTGGCTCAAATCGAGGTATCAGCATCAGTTCATACAACATAATACAAGCGAAAGAACCTGGCATTGTGAAGTTCACCATGGAGGAAATCTACCAAGTCACAAGAAATTTCTCCCCTTCTTTCAAGATTGGCCAAGGTGGTTTTGGTGCTGTCTACAAGGCAAAACTTCTAGATGGGACTGTTGTTGCAAGTGAGATCCAGACACTATCGCGGGTGGAACATCTGAACTTGGTCAAGTTCTATGGATATTTGGAGCAAGAGGATGAAAGGATCATTGTTGTTGAGTATGTTCCAAATGGAACCCTTAGAGAGCATTTAGATTGCATTCATGGAAGCGTTCTGGACCTTACTTCACGTCTAGATATAGCAATTGATGTTTCTCATGCTCTCACCTATCTTCATGTGTATATAGATCATCCCATCATTCATAGAGACATAAAATCTTCAAACATTCTTCTCACTGAAAATTTTCGAGCTAAGGTAGCAGACTTTGGTTTTGCTAGACAGGCCCCTGACGGTGACTCTGGCATGACACATGTTTCTACTCAAGTTAAAGGAACAGCTGGCTATTTGGACCCTGAATACCTGAAAACTTATCAACTAACTGAAAAGAGTGATGTGTATTCATTTGGAGTTTTGCTTGTTGAACTTGTCACAGGCAGACGCCCCATTGAACCAAAATTTGAACTCAGGGAGCGAATAACAGCAAAATGGGCTATGAAGAGATTCATAGATGGAGATGCTATCTCAGTCTTGGACCCAAGACTGGAACAGACTGCAGCAAATACTTTGGCACTTGAGAAGATTCTTGAGCTAGCTTTACAGTGCTTGGCTCCACGTAGACAAAACAGGCCTAGCATGAAGAGATGTGCTGAGGTGCTTTGGACCATCCGCAAGGATTTCAGAGAGCAGCTATCAGCTTCAAACTTTCGCTCATATTCCACAACTTCCGAAAGGAACACCTCAATGAAAGAGTGAGAAGACCAAAGTTGCATGAAAGAATGTAAGCTGGGACAAACCATGGCCTTGGGAGGAAAACCATTCTTCTCTATAATGATATGCACCTGGGATGGTTGGTGTTGGACTAAGGTGGAATATAGAAATTCATATTTTGTGGAAGTTGTACATTGAGAGTTTTGGCTTGTGTATAGGAATGGGGGAGCATTCTTCCCTTAAAGATGAGTGCCTTACTTTCCTTAATTGTGTATTTCTGTTTCTTCTTGGGACACACAAGGAGGAAAACTTTTATTCTATTGATTGGAAACTTGATTGGTGTATTAGTGTATAATTACTACCTGGGTATAATACTTTCTGCGGTTAAATATATGATTCACTCTTTCTTTCTGC 1796 0.4427 MTSPYTNHHRSSSDHRSTRSKVPTSPYASSELTTSTVSSRRNPVSAAAKSFAGIFAGCFTPPDPVSSKSLGDSEEFKSSSTVSNASRSGSQRGRGSNRGISISSYNIIQAKEPGIVKFTMEEIYQVTRNFSPSFKIGQGGFGAVYKAKLLDGTVVASEIQTLSRVEHLNLVKFYGYLEQEDERIIVVEYVPNGTLREHLDCIHGSVLDLTSRLDIAIDVSHALTYLHVYIDHPIIHRDIKSSNILLTENFRAKVADFGFARQAPDGDSGMTHVSTQVKGTAGYLDPEYLKTYQLTEKSDVYSFGVLLVELVTGRRPIEPKFELRERITAKWAMKRFIDGDAISVLDPRLEQTAANTLALEKILELALQCLAPRRQNRPSMKRCAEVLWTIRKDFREQLSASNFRSYSTTSERNTSMKE 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02050 418 MobiDBLite consensus disorder prediction 66 97 - -
Pste6g02050 418 Gene3D Phosphorylase Kinase; domain 1 95 156 - -
Pste6g02050 418 MobiDBLite consensus disorder prediction 1 43 - -
Pste6g02050 418 FunFam Calmodulin-binding receptor-like cytoplasmic kinase 3 190 401 - -
Pste6g02050 418 Pfam Protein kinase domain 154 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02050 418 Gene3D Phosphorylase Kinase; domain 1 157 190 - -
Pste6g02050 418 SUPERFAMILY Protein kinase-like (PK-like) 107 391 IPR011009 -
Pste6g02050 418 PANTHER OS01G0750732 PROTEIN 45 399 - -
Pste6g02050 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Pste6g02050 418 MobiDBLite consensus disorder prediction 71 97 - -
Pste6g02050 418 MobiDBLite consensus disorder prediction 18 43 - -
Pste6g02050 418 Gene3D Transferase(Phosphotransferase) domain 1 191 413 - -
Pste6g02050 418 ProSiteProfiles Protein kinase domain profile. 130 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02050 418 SMART serkin_6 130 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02050 Pste-Chr6 9618462 9622602 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02050 117 390 Receptor kinase-like Gene Family AT1G30570 43.448 1.72e-65 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IV Pste6g02050 Pkinase 7.9e-41 CL0016