Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste6g02042 | atgggtcgccattcctgttgtgtaaagcaaaaattgaggaaaggcttatggtcccctgaagaagatgagaagctattcaattacataaccagatacggagttggatgctggagttcggttcccaagctagctggactgcaaaggtgtggaaagagttgcaggttgagatggataaactatttgaggcctgatttaaagagagggatgttctcacagcaggaggaggatcttatcatcagccttcatgaagttcttggaaacaggtgggctcaaatagcagcacagttgccagggagaacagataatgagattaaaaacttctggaattcatgtttaaagaagaagcttctgaagcaagggattgacccaactacacacaagccccttacacaagctcatgtaaaggaagaaaagaaaatcacagagacatcacctaggcaaacaccattgtctcaaggcccttctgttccattaacctttccttcatcacagggatcatcacttctaatagataccgattactatgatggagggctaacagaagcttcaagagaaatgttcatgaacaagccagcattggaccctttatcctactatgattttccattgggtgtcgcgcagtctggttttaacttacctatgagtcagtatcacacaggccttaaagcatcttatcagagctcctttggacccaattcatgctatggattcctttcaatgccaagtctaacaaattctgatcatgggaacgtgtcggtgacagagttttcagacaacaattcagcttccaaaatcagttcattgttcatgaatgaccaagtgaaagaaagttccagcaatagctcaaacatgagcaccatttatccaggaggagggtgtcatatcagcagcatgatagaaaatgcagggttctcgtgggagggtgacaacaaatttgaccctttgtttcagtttcaagaaaattccacaaaatccgaggcttttaagacaagttcatgggaagaagggcagctgcagactcacagttcgatagatttcactagctttccgttaacatcactttcagaagatctaacaggagcaaattttgatgtattccagcatatatga | 1110 | 0.0 | MGRHSCCVKQKLRKGLWSPEEDEKLFNYITRYGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSCLKKKLLKQGIDPTTHKPLTQAHVKEEKKITETSPRQTPLSQGPSVPLTFPSSQGSSLLIDTDYYDGGLTEASREMFMNKPALDPLSYYDFPLGVAQSGFNLPMSQYHTGLKASYQSSFGPNSCYGFLSMPSLTNSDHGNVSVTEFSDNNSASKISSLFMNDQVKESSSNSSNMSTIYPGGGCHISSMIENAGFSWEGDNKFDPLFQFQENSTKSEAFKTSSWEEGQLQTHSSIDFTSFPLTSLSEDLTGANFDVFQHI | 369 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste6g02042 | 369 | PANTHER | MYB DOMAIN PROTEIN 55 | 1 | 313 | - | - | |
| Pste6g02042 | 369 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 66 | 116 | IPR017930 | - | |
| Pste6g02042 | 369 | FunFam | MYB transcription factor | 11 | 67 | - | - | |
| Pste6g02042 | 369 | CDD | SANT | 70 | 109 | IPR001005 | - | |
| Pste6g02042 | 369 | MobiDBLite | consensus disorder prediction | 129 | 143 | - | - | |
| Pste6g02042 | 369 | CDD | SANT | 17 | 61 | IPR001005 | - | |
| Pste6g02042 | 369 | ProSiteProfiles | Myb-like domain profile. | 9 | 61 | IPR001005 | - | |
| Pste6g02042 | 369 | ProSiteProfiles | Myb-like domain profile. | 62 | 112 | IPR001005 | - | |
| Pste6g02042 | 369 | MobiDBLite | consensus disorder prediction | 123 | 160 | - | - | |
| Pste6g02042 | 369 | FunFam | Transcription factor MYB86 | 69 | 137 | - | - | |
| Pste6g02042 | 369 | Gene3D | - | 68 | 144 | - | - | |
| Pste6g02042 | 369 | Pfam | Myb-like DNA-binding domain | 67 | 111 | IPR001005 | - | |
| Pste6g02042 | 369 | Pfam | Myb-like DNA-binding domain | 14 | 61 | IPR001005 | - | |
| Pste6g02042 | 369 | Gene3D | - | 11 | 67 | - | - | |
| Pste6g02042 | 369 | MobiDBLite | consensus disorder prediction | 144 | 160 | - | - | |
| Pste6g02042 | 369 | SMART | sant | 13 | 63 | IPR001005 | - | |
| Pste6g02042 | 369 | SMART | sant | 66 | 114 | IPR001005 | - | |
| Pste6g02042 | 369 | SUPERFAMILY | Homeodomain-like | 12 | 108 | IPR009057 | - | |
| Pste6g02042 | 369 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 9 | 65 | IPR017930 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste6g02042 | Pste-Chr6 | 9569189 | 9570841 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste6g02042 | 1 | 139 | MYB Transcription Factor Family | AT4G01680 | 81.295 | 5.23e-81 | 246 |
Transcription factors information