Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02028 CAACGTGATTTCCAGAGTGTTTCCTGCGAAGACTATGATGAGCATGTTCACATTGAGCAGCATGAGGCAGCACTGATTGAAACAATTGTTAGACACATCCAGAAAAAAATAATTCCTAGATTTCCATGTTGCACAGATAACCTTGTTGGCATTGATTCACGGATGGAGGAAGTGAATTCACTCATAGGCACATGGTCAAATGATGTTCGCTTCATAGGAATATGGGGCATGGGAGGCATAGGTAAGACCACCATTGCGAGATTAGTCTATGAAACAATCAAAAAGGAATTCAATGTTAGTTGCTTCCTTGAAAGCATTAGAGAGGTGTCAAAGACAAATGGCTTAGGATCTGATGAAATTCAAGGTATAGTTCTGAACTTAGTTCAACCGTGTGATTATGAAGCACGCTGGAGCGCTGAAGCCTTCTCCAAGATAGGTCAGCTAAGGTTACTCAAGTTATGTGATATGCAGCTTCCCTGTGGCCTGAACTGCCTTCCTAGAGCACTGAAAGTTCTGCATTGGAGAGGATGTCCTTTGAAAACCCTGCCACTTGCTAATCAACTAGATGAAGTTGTTGAGCTTAAATTGCCTCATAGCAGAATAGAACAAATTTGGCACGGGACAAAGTTTCTGGAAAATCTGAAGTCCATGAATTTGAGCTTTTCCAAGAACCTAAAGCAGTCCCCAGACTTTTTTGGGGTTCCAAATCTTGAATCATTGGTTCTTGAAGGTTGCACAAATTTAACTGAGGTTCATCCATCCCTTGTACGCCATAAGAAACTTGTTATGATGAATTTAAAAGACTGCAAAAGGCTCAAAACTCTTCCAAGTAAATTGGAGATGAGTTCCTTGAAAGATTTAAATCTTTCTGGTTGCTCTGAATTTAAATATCTTCCAGAGTTTGGGGAAAGCATGGAACATTTTTCAGTGCTTTCTTTAGAGGGGAGTGCTGTAACAAAACTACCTATATCATTGGGATGTCTAGTTGGCCTTGCTCATTTGGATTTGAAGAATTGCAAGAATCTTGTCTGCCTTCCAGATACCATTGATAAATTAAAATCCCTCACAATTCTGAATGTTTCTGGCTGCTCAAAACTCAGTAGCTTGCCAGAGGGTTTAAAGGAAATCAAGTGTTTGGAGGAACTTGATGCAAGTGAAACTGCCATTGAAGAGCTACCTTCATCCATCTTTTTTCTGGAAAACCTCAAATATATCTCATTTGCTGGGTGCAAGGGACCAGTATCCAACTCAGTAAATAAATTTTTTCTCCCCTTTAAGAGGCTGTTTGGGAATCAACAAACTCCTATAAGATTTAGATTACCACCTTCCATACTGAATCTACCCTCTTTGAGAAGGCTAAATTTAAGTTACTGCAATCTATCGGAAGAGTCAATTCCAGATGATTTTTGTCACTTATCTTCACTGCTGACTCTAGATCTCACTGGCAACAACTTTGTTAGCTTACCAATTAGCATTACCAAACTCGCAAAGCTTGAGCATCTTATCCTAAACTGCTGTGAAAAGCTTCAAAGGTTGCCCGAGCTTCCACCAAGAATGCAACTATTGGATGCAAGCAATTGCACTTCACTAGACACTTCCAAATTCAATCCATCCAAGCCTTGCAGTCTCTTTGCATCTCCTACAAACAGAACATTAATAAGAGAAATGATCAAAAACCTTTTTAAGGAACTCCGAGTTCCCAAAGCAAGATTTGACATGCTTATCACAGGGAGTGAAATTCCATCATGGTTTGTCCCTCAAAAATATGCTTCAGTTGCAAAAATAACAGTCCCTCATAATTGCCCTCTAAATGAATGGGTGGGATTTGCTTTGTGTTTCCTGTTAGTAAGTTATGCTGTTCCACCCGAAGTATGCCATCATGAAGTTGATTGCCACTTGTTTGGACCTAATGGTAAGATGTTTATCAGCTCCAGGGATTTACCTCCCATGGAGCCCTGTTATCCTCACCTTTATATTCTCTACTTGTCCATTGATGATTACCGTGACAGAATTTATGAAGGTGGTGACTACAGTGAAATTGAATTTGTATTGAAAAGTTATTGTTGCCATTCGTTGGAAATAGTGAAGTGTGGGTGTCGTTTGGTATGTAAGCAAGATGTTAAAGATATTTATGGAAATAATTTGTAGGCATTATCCTGATATTGACAATTGTTTCATTTTTTTCTAGTGAAGAGTAATTAGTGAGTTATATAGAAACTTTTCATTCTCCGTACAACAACTTTTCC 2246 0.3905 QRDFQSVSCEDYDEHVHIEQHEAALIETIVRHIQKKIIPRFPCCTDNLVGIDSRMEEVNSLIGTWSNDVRFIGIWGMGGIGKTTIARLVYETIKKEFNVSCFLESIREVSKTNGLGSDEIQGIVLNLVQPCDYEARWSAEAFSKIGQLRLLKLCDMQLPCGLNCLPRALKVLHWRGCPLKTLPLANQLDEVVELKLPHSRIEQIWHGTKFLENLKSMNLSFSKNLKQSPDFFGVPNLESLVLEGCTNLTEVHPSLVRHKKLVMMNLKDCKRLKTLPSKLEMSSLKDLNLSGCSEFKYLPEFGESMEHFSVLSLEGSAVTKLPISLGCLVGLAHLDLKNCKNLVCLPDTIDKLKSLTILNVSGCSKLSSLPEGLKEIKCLEELDASETAIEELPSSIFFLENLKYISFAGCKGPVSNSVNKFFLPFKRLFGNQQTPIRFRLPPSILNLPSLRRLNLSYCNLSEESIPDDFCHLSSLLTLDLTGNNFVSLPISITKLAKLEHLILNCCEKLQRLPELPPRMQLLDASNCTSLDTSKFNPSKPCSLFASPTNRTLIREMIKNLFKELRVPKARFDMLITGSEIPSWFVPQKYASVAKITVPHNCPLNEWVGFALCFLLVSYAVPPEVCHHEVDCHLFGPNGKMFISSRDLPPMEPCYPHLYILYLSIDDYRDRIYEGGDYSEIEFVLKSYCCHSLEIVKCGCRLVCKQDVKDIYGNNL 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02028 715 Gene3D Ribonuclease Inhibitor 154 296 IPR032675 -
Pste6g02028 715 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 121 301 IPR044974 GO:0006952
Pste6g02028 715 SMART LRR_typ_2 376 399 IPR003591 -
Pste6g02028 715 SMART LRR_typ_2 447 471 IPR003591 -
Pste6g02028 715 SMART LRR_typ_2 472 495 IPR003591 -
Pste6g02028 715 SMART LRR_typ_2 234 258 IPR003591 -
Pste6g02028 715 Pfam C-JID domain 576 707 IPR045344 -
Pste6g02028 715 Gene3D - 29 153 IPR027417 -
Pste6g02028 715 Pfam NB-ARC domain 64 128 IPR002182 GO:0043531
Pste6g02028 715 SUPERFAMILY L domain-like 131 531 - -
Pste6g02028 715 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 119 IPR027417 -
Pste6g02028 715 PRINTS Disease resistance protein signature 71 86 - -
Pste6g02028 715 PRINTS Disease resistance protein signature 350 366 - -
Pste6g02028 715 Gene3D Ribonuclease Inhibitor 297 543 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02028 Pste-Chr6 9485606 9490560 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02028 272 522 WRKY Transcription Factor Family AT4G12020 27.692 1.50e-06 50.1