Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02024 atgaaaagagaggagaagtcctcctccattgataggatgtgtagttggaaaacatccttggccggcaaggtcttcttcctcttgctccacctctcactcttcattagtcctgcactttcccttgagttcctattcaactcctttgccggcgtaacaaacctcactctcatcaaagacgcccgcatcgacgcctccgtcatccgcatgaccaacgactccaatcagtactcatacggccgcgccttctaccctgtaaaactccccatgactaattcttccttctccacctcttttgttttctccatcttgcctcaaatccctaccagccctggcttcggtttggccttccttctctgcaacaccaccgatcctcccgctgctctcgctagccagtactttggtttattcaccaacgccacctccccctccgttttccctctcatcgccgtcgagtttgacaccggccagaaccccgagttcaacgacatcgacgacaaccacattggaatcgacctcaacaacatcgaatccaccttagcaactcccgccggttactacaactccactggcgccttcgtccctctgcgcatgcgcaccggccaaaacatccgcgcctggattgactttgacgccctcaatttccagttcaacgtcaccgtcgcgccaattggcgtctcacgcccgtcgaggcccactcttacgcatatagatcccaacatagctaactacgtttctgctgacatgtacgtcgggttttccgcttccaaaaccaactggatcgaggctcagagagttctggcgtggagcttcagcgactcaggacctgccagggagctcaacacaaccaacttaccagtgttcgagccggaatcctcgtcttcctcgctttctggtggagccatagcgggaatcgttattggttgttgtatttttgttcttctatgtgcttctggtttgtacttatggtggcgaatcaagaaagggaaagatgaggaagaggaggagatcgaagattgggagttagagtattggccgcatagattttcctacgaggaattaagttcagcgacaggggagtttgggaaggataagttgttaggttcgggagggttcgggagagtgtacagagggacgttatcgaacaacacgcaaatagcggtgaagtgtgtgaaccacgattccaggcaagggttgagggagttcatggcagagatttctagcatggggaggttgcagcataagaacttggtccaaatgcggggttggtgtagaaaggggaacgagcttttgttggtttatgatttcatgcctaatgggagcctcaacaagtgggtgttcgaccgcccggagaagcttctcggatgggagcaacgacgtcgtattctggtggacgtggcagaagggcttaactaccttcaccacggctgggaccaggttgttatccaccgagacattaaatccagcaacatattgttggacgccgacatgagagggagactaggggactttggtctggccaagctttacacgcacggggagattcccaacaccacacgtgtggtgggcacgttggggtacttggcgcctgagttggccacggttgcagcgcccacttctgcgactgatgtctacagctttggcgtggtgctgttggaggtggcgtgtggaaggcgtcccattgagacatcggtggtggaggaggaggtggtgctcattgattgggtcagggacttatacgccaaaggttgctcccttgaagctgccgatgacaggatcagagaggagtacgatcagggagatatggagatggtgttgaagcttggcttggcttgttgccaccctgatcctcagaggagacccactatgaaggaagttgttgcgcttctccttggagaggacccgcctgaggcacccggaaaagtcttgtccgatttggtccgcggcgggggcgcccacgatttggatgagccgccgcattcgccaccatcctccgctccaatttga 2004 0.0 MKREEKSSSIDRMCSWKTSLAGKVFFLLLHLSLFISPALSLEFLFNSFAGVTNLTLIKDARIDASVIRMTNDSNQYSYGRAFYPVKLPMTNSSFSTSFVFSILPQIPTSPGFGLAFLLCNTTDPPAALASQYFGLFTNATSPSVFPLIAVEFDTGQNPEFNDIDDNHIGIDLNNIESTLATPAGYYNSTGAFVPLRMRTGQNIRAWIDFDALNFQFNVTVAPIGVSRPSRPTLTHIDPNIANYVSADMYVGFSASKTNWIEAQRVLAWSFSDSGPARELNTTNLPVFEPESSSSSLSGGAIAGIVIGCCIFVLLCASGLYLWWRIKKGKDEEEEEIEDWELEYWPHRFSYEELSSATGEFGKDKLLGSGGFGRVYRGTLSNNTQIAVKCVNHDSRQGLREFMAEISSMGRLQHKNLVQMRGWCRKGNELLLVYDFMPNGSLNKWVFDRPEKLLGWEQRRRILVDVAEGLNYLHHGWDQVVIHRDIKSSNILLDADMRGRLGDFGLAKLYTHGEIPNTTRVVGTLGYLAPELATVAAPTSATDVYSFGVVLLEVACGRRPIETSVVEEEVVLIDWVRDLYAKGCSLEAADDRIREEYDQGDMEMVLKLGLACCHPDPQRRPTMKEVVALLLGEDPPEAPGKVLSDLVRGGGAHDLDEPPHSPPSSAPI 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02024 667 PANTHER - 58 633 - -
Pste6g02024 667 ProSitePatterns Protein kinases ATP-binding region signature. 366 388 IPR017441 GO:0005524
Pste6g02024 667 Gene3D - 39 288 - -
Pste6g02024 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Pste6g02024 667 MobiDBLite consensus disorder prediction 633 667 - -
Pste6g02024 667 CDD lectin_legume_LecRK_Arcelin_ConA 41 274 IPR001220 GO:0030246
Pste6g02024 667 FunFam L-type lectin-domain containing receptor kinase S.1 345 435 - -
Pste6g02024 667 Pfam Legume lectin domain 40 284 IPR001220 GO:0030246
Pste6g02024 667 Gene3D Transferase(Phosphotransferase) domain 1 436 636 - -
Pste6g02024 667 SUPERFAMILY Protein kinase-like (PK-like) 341 630 IPR011009 -
Pste6g02024 667 ProSiteProfiles Protein kinase domain profile. 360 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02024 667 SMART serkin_6 360 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02024 667 CDD STKc_IRAK 366 629 - -
Pste6g02024 667 SUPERFAMILY Concanavalin A-like lectins/glucanases 38 287 IPR013320 -
Pste6g02024 667 FunFam L-type lectin-domain containing receptor kinase S.4 39 278 - -
Pste6g02024 667 FunFam L-type lectin-domain containing receptor kinase S.4 436 640 - -
Pste6g02024 667 Pfam Protein kinase domain 362 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02024 667 ProSitePatterns Legume lectins beta-chain signature. 148 154 IPR019825 -
Pste6g02024 667 Gene3D Phosphorylase Kinase; domain 1 345 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02024 Pste-Chr6 9469686 9472017 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02024 36 631 Receptor kinase-like Gene Family AT1G15530 69.344 0.0 816
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pste6g02024 Pkinase 1.1e-50 CL0016