Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02019 atggcatccaaacccttacttaacaacaacaaaagttctattaagttcctctatagctatggcggtaagatccttcctcgccacaatgacggcaagctccgataccaaggtggccacaccagagtccttgtcctccatccctccgcttctttttcagagctcatggaaaagcttaatgacttgtgtggttcgccggtaacacttcggtgtccattgcccaacggagacttggacacattgatttccgtaaaaaacgatgaagatttggccaatataatagaggaatacgatcgagcttcttcgtcgttacctcatcccttgaagatcagagccattctttggccgccaaagaaatcgtctcctcctccgtcttcttcgtccagcgccgctcactctcggtccggttcgcctcactcctccgcccattccatgcggtgctcgccggcgcctgttgcgtatccaattcctgtccgtaacggaacggcgaaaggctgttggtgcatgaggcactggaacggaaacccaagattcctttaccgtgggccatactggaataattatttccactga 570 0.0 MASKPLLNNNKSSIKFLYSYGGKILPRHNDGKLRYQGGHTRVLVLHPSASFSELMEKLNDLCGSPVTLRCPLPNGDLDTLISVKNDEDLANIIEEYDRASSSLPHPLKIRAILWPPKKSSPPPSSSSSAAHSRSGSPHSSAHSMRCSPAPVAYPIPVRNGTAKGCWCMRHWNGNPRFLYRGPYWNNYFH 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02019 189 PANTHER OS05G0427100 PROTEIN-RELATED 13 128 - -
Pste6g02019 189 SUPERFAMILY CAD & PB1 domains 29 120 - -
Pste6g02019 189 CDD PB1_UP2 19 113 - -
Pste6g02019 189 MobiDBLite consensus disorder prediction 123 143 - -
Pste6g02019 189 Gene3D - 32 111 - -
Pste6g02019 189 Pfam PB1 domain 30 101 IPR000270 GO:0005515
Pste6g02019 189 SMART PB1_new 28 116 IPR000270 GO:0005515
Pste6g02019 189 MobiDBLite consensus disorder prediction 114 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02019 Pste-Chr6 9436455 9437394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02019 14 123 MAP Kinase Kinase Kinase AT1G04700 46.364 1.96e-22 92.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02019 6 9436455 9437394 Pste6g02019 6 9436455 9437394 ECH
Pste6g02019 6 9436455 9437394 Pste2g00564 2 5355058 5357109 PCT