Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02017 AGAAAAAGTAAATTGTGTTGGTCGCCTAACAGTATTACACTGATCTTCATTTTGTTCATGTTTCCATTTCGGTTTGGTTCCTACAGCACTCACAAAAATCGATTCAACATGAAAGCAAATTGAATTGACGCGATACTAGGCTTGATTGAAATCTCATCAAACAATGTCATCACTGTTTTCTTTCTAGCGTTGAGTTGTTAGTGTGCTTAACAATGGCAGCTGTTAGGTCTAACCCTGTAAGACGGTTAGGAAGCACAGTCAAAGGTTCTTTCAATATGGAATTAGTTCAACACCACAGATATTACCATAGTGTATGTGTGAACCTTGCAAAATTGCCAAGTGATTCACTGAGTCATCCTTATTACAACAGAGAGTTACAGTTTTCTAGGAATTTGGCTTCTGGCTCCCTTGGAAGTACTCACCACTTTGGTACTAGAGCCAATGTATCGTTTAATCCTAGATTCTCTACCTTTTGTTTTCGGAGTGCCCTTCCTTTTGCTTCCACGAGCCACGTGTTGAACCGTCGAATGTATTCCTCATCAGTGGGTGACAAAGGAAGTAGAGATGGTGGCACAGAGGTAGCTGCTGGTTCTGGTGTGAGTGATATGAATGCTAGTGGTGATTCTGTGGTTGCAGGTGATTGGGCTGAGAGGATTAAAGATGCTTGGAAGAGTGTGGTAGAGACAACATCATATGCTGGGGAAAAGGTTAAAGAAGCTTCTGATGATCTCACTCCATATGCTCAGCAGTTGCTTGATTCTCACCCTTATCTTAACAAGGTGGTTATTCCAGTTGGTGGTACTTTAACAGCTACTATGATAGCCTGGTTCTTGCTGCCTAGGATTTTAAGGAAGTTTCACAAATATGCGATGCAAGGACCCATTTCTCTATTGCCAGGAAGTGTGTCTGGGGGGGAGCCAGTTCCTTATCAGAAAAGCTTTTGGGGTGCTATGGAGGATCCTATGCGATATTTAGTCACCTTCATTGCATTCTCACAGATTGGTGTAATGGTAGCTCCAACAACTATAACCTTACAACATCTTGCACCCGTTTGGAGGGGTGCAGTTATAGTTTCATTCGTATGGTTTTTGCATAGATGGAAATCAAATGTTTTTACTCGGACATTGTCCAGCCAAAGTTTACTTGGACTTGATAGGGAGAAAGTGCTTGCTCTAGACAAAATATCATCTATTGGTCTATTTGTTATTGGTATAATGGCATTGGCTGAGGCTTGTGGTGTGGCAGTGCAATCTATTGTGACTGTTGGTGGTATAGGAGGGGTGGCTACTGCTTTTGCTGCCAAGGACATTCTGGGCAACGTGTTCAGTGGTTTATCTATGCAGTTTTCAAAGCCATTTTCAATTGGAGATACAATAAAAGCTGGCTCGATAGAGGGTCAAGTGGTGGAAATGGGTCTTACTACTACGTCATTGCTGAGTTCTGAGAAGTTCCCAGTTATTGTGCCAAACTCATTTTTTTCTAGCCAGGTCATTGTGAACAAGTCCCGTGCTGATTATCGTGCCATTATTACCAAAATTCCACTGCAAACAGAGTGTTTAAGCAAGATTCCCCAGATATCAGATGACGTGAAAAGCATGCTAAACTCAAATGCAAAGGTTTTCTTAGGAAAAGATGTTCCCTACTGTTACTTATCCCGTATAGAAAGTTCATATGCAGAATTGACTCTTGGATACAACCTCAAACAAATGCGCAGACATGAATTATACTCTGCAGAACAAGATATTCTCCTGCAGGCAGTTCAGATCATTAAGAATCACGGGGTTCCTCTTGGCAGCACATGGCAAGACATGTCTTCTAAATGATCTGCTTGATGCCAATTTTGGAACAACTGATTGCAAGATAAGTGAGCTATAACTTTTACAAATACAATGCCTACAGGGATATTAATTTGTCATTCGTTTACACTGAAGCAGTTTCTCGATAATAGATTGACATGTATACGTGGTTCATTTTTTACTTCAGATTTTAACATTGATTTACTTAAAAATATATTTTTTTATGTTATGAGTGA 2032 0.404 MAAVRSNPVRRLGSTVKGSFNMELVQHHRYYHSVCVNLAKLPSDSLSHPYYNRELQFSRNLASGSLGSTHHFGTRANVSFNPRFSTFCFRSALPFASTSHVLNRRMYSSSVGDKGSRDGGTEVAAGSGVSDMNASGDSVVAGDWAERIKDAWKSVVETTSYAGEKVKEASDDLTPYAQQLLDSHPYLNKVVIPVGGTLTATMIAWFLLPRILRKFHKYAMQGPISLLPGSVSGGEPVPYQKSFWGAMEDPMRYLVTFIAFSQIGVMVAPTTITLQHLAPVWRGAVIVSFVWFLHRWKSNVFTRTLSSQSLLGLDREKVLALDKISSIGLFVIGIMALAEACGVAVQSIVTVGGIGGVATAFAAKDILGNVFSGLSMQFSKPFSIGDTIKAGSIEGQVVEMGLTTTSLLSSEKFPVIVPNSFFSSQVIVNKSRADYRAIITKIPLQTECLSKIPQISDDVKSMLNSNAKVFLGKDVPYCYLSRIESSYAELTLGYNLKQMRRHELYSAEQDILLQAVQIIKNHGVPLGSTWQDMSSK 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02017 536 Pfam Mechanosensitive ion channel 323 524 IPR006685 GO:0016020|GO:0055085
Pste6g02017 536 PANTHER YNAI-RELATED MECHANOSENSITIVE ION CHANNEL 144 529 - -
Pste6g02017 536 SUPERFAMILY Sm-like ribonucleoproteins 365 430 IPR010920 -
Pste6g02017 536 Gene3D - 381 429 IPR023408 -
Pste6g02017 536 MobiDBLite consensus disorder prediction 109 128 - -
Pste6g02017 536 Gene3D - 279 380 - -
Pste6g02017 536 SUPERFAMILY Mechanosensitive channel protein MscS (YggB), transmembrane region 280 364 IPR011014 GO:0016020
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02017 92 532 Mechanosensitive Ion Channel Family AT4G00290 60.998 0.0 555