Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02006 CATGCGTGTCCGCTTGAAAAGCCTCATACTCATACCCCTCTCCAGTCTCTACTCTTTCTATGTCTTCAAATTGAAGTGCCTCATAGTTTGCCCATTTTCCACTTTGAATCACCCTATTTATTTTGGGTCTCTTCTCTTTCTTCTTCTTCTTATATCTTAGTTTTGGTATTGAATTGAGTTGAGAAGAGGTCATAGACACAAGACATGTCTGCTGTTGAGTCTGGTGAGCACAACAACATCAGAGGGGTACCAACACATGGTGGACGCTACATTCAGTACAATATCTATGGCAACCTATTCGAAGTTTCCCGAAAGTATGTCCCTCCTATTCGCCCTGTGGGTAGAGGAGCTTATGGAATTGTTTGTGCTGCTGTTAATGCGGAGACAGGTGAAGAAGTTGCCATTAAGAAGGTTGGCAATGCATTTGACAACAGAATAGATGCCAAAAGGACCTTACGAGAAATTAAACTTCTTCGGCACATGGATCATGCAAATATTATGTCCATTAAAGATATCATACGTCCTCCACAGAAGGAAAACTTCAATGATGTTTACATGGTTTCTGAGTTAATGGACACAGATCTACATCAAATAATACGTTCCAATCAACCATTGACTGATGATCATTGTCGGACTGGACAAAGTTCTGTCTGTGTACTAGGTGATGTAGGTCTTACCTCACTTGTTGGGTCCACACCATCTATTAAACTGCATGTTTATGGGCTTCATGTGTATTTTCTGTATCAATTGTTACGAGGGCTCAAATATGTACATTCAGCAAATGTTTTGCACCGTGATCTAAAGCCCAGCAATTTGCTATTGAATGCAAATTGTGACCTTAAGATTGCTGATTTTGGTCTTGCTAGAACTACATCTGAAACTGATTTTATGACTGAGTATGTGGTCACTCGATGGTACCGAGCTCCCGAATTGCTTCTTAATTGTTCAGAATATACAGCAGCCATTGATATATGGTCTCTGATAGGTTCTCCCGATGATGCCAGCCTTGGATTTCTACGAAGTGATAATGCTCGTAGATATGTAAAACAGCTTCCCCAATATCCGAAGCAAAACTTTTCTGTTAGATTTACTAACATGTCTCCTGGTGCAGTTGATTTACTAGAGAAGATGCTCATCTTTGATCCAAACAGGCGTATTACAGTTGATGAGGCGTTGTGCCACCCATACATGGCACCTCTCCATGACATCAATGAGGAACCTGTTTGCACCAGACCTTTCAGTTTTGACTTTGAACAACCATCATTCACTGAAGAAGATATCAAGGAACTCATCTGGAGAGAATCTGTGAAGTTCAACCCTGTTCCACCAGTGTACTGAGATTTTGTATTTATGTTGGATATGCTTAGTGAAATATTTGATGAGATGACTAATATACTGGTTATGACACTACGTGGCAAGTTACAGCATACCACAAGATATAAAACATATTGGAGATACTGAGATTCACTGAGCTTGTTGTAGGTTTCTTTCATTTCTGTCTCCTCTCAGATTCTTGGATACTCGTATTGTTCAGATGTACCGAGGAAATGATCAGAAGACATGCTGCTTTACCCAAAGGTTTCAGCAGAATATCCTGAAGCTCCAACTCCTTGGTGTACTTCTATCCTGCATTTTAGACTCGAGGACCATAGCTTAGTGCACTGAACTGTTCTTGTCAGTTTTTATATCCTTTACAACAAGAAAAATTTTCAGTTGTGGGGACAGACATTATCCCTTATTCCCATTGTATGACATAAAATGTAATGGTTTGTTAGAGTATTCGAAATAATTTAAAAAAATCCTATGTCAAACATACCTTGT 1821 0.3954 MSAVESGEHNNIRGVPTHGGRYIQYNIYGNLFEVSRKYVPPIRPVGRGAYGIVCAAVNAETGEEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHANIMSIKDIIRPPQKENFNDVYMVSELMDTDLHQIIRSNQPLTDDHCRTGQSSVCVLGDVGLTSLVGSTPSIKLHVYGLHVYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIADFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSLIGSPDDASLGFLRSDNARRYVKQLPQYPKQNFSVRFTNMSPGAVDLLEKMLIFDPNRRITVDEALCHPYMAPLHDINEEPVCTRPFSFDFEQPSFTEEDIKELIWRESVKFNPVPPVY 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02006 377 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 259 330 - -
Pste6g02006 377 Gene3D Transferase(Phosphotransferase) domain 1 259 343 - -
Pste6g02006 377 FunFam Mitogen-activated protein kinase 170 261 - -
Pste6g02006 377 SMART serkin_6 39 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02006 377 ProSiteProfiles Protein kinase domain profile. 39 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02006 377 FunFam Mitogen-activated protein kinase 24 133 - -
Pste6g02006 377 Pfam Protein kinase domain 43 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g02006 377 Gene3D Phosphorylase Kinase; domain 1 16 143 - -
Pste6g02006 377 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Pste6g02006 377 Gene3D Transferase(Phosphotransferase) domain 1 176 258 - -
Pste6g02006 377 ProSitePatterns Protein kinases ATP-binding region signature. 45 69 IPR017441 GO:0005524
Pste6g02006 377 SUPERFAMILY Protein kinase-like (PK-like) 42 336 IPR011009 -
Pste6g02006 377 Gene3D Phosphorylase Kinase; domain 1 344 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02006 Pste-Chr6 9375745 9381489 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02006 6 372 MAP Kinase Gene Family AT4G01370 72.475 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Pste6g02006 Pkinase 8.6e-55 CL0016