Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01993 AATTGTTCCCTCTTGCAAAAGAAAAAAAAAAGCACACATCGTCTTCCCCTTCAAACATTTTTCTCCTCTTTGCACCCTATACCAATGCCACACTGTGTCTGTAATTGTAACCAATAGCCATGTCAGTATACGACGCCGCTTTCGTGGACACTCAGCTCTCTAAACGCACTTCAATATTGGGTCTCCGGCTCTGGGTCGTCATCGGCGTCCTCGTGGGATCCATCATCGTCATCACCCTCTTCCTCCTCTCCCTCTGCCTCACCTCCCGCCGCCGCCACCACAACAAACCCTGCCGCGCCCCTGCCCCCACCCCCACCCCCACCCCTCCCATCTCCAAGGAAATCCTCGAGATCGTCCACGTCCCCCCTCCTCCTCCGCCTCCCAAGGCCCTCTACTCCAGCGGGGAGAGCAGGCTCGCCGCCAGCGTATGCGAAACCACCTCTTCTCGAGACAGCGGGCCTGTGGGCCCCCAAGTGTCTCATCTTGGCTGGGGCAGGTGGTACACTCTCCGAGAACTCGAAGCTGCCACTAATGACTTTTGTGAGCACAACGTCATTGGCGAAGGTGGCTATGGTATTGTCTATCGTGGATTGTTACCTGATGCCACCAAAGTTGCTGTTAAGAATCTTTTGAACAATAAAGGCCAAGCTGAGAGAGAATTTAAAGTAGAGGTAGAAGCAATTGGTCGTGTGCGCCATAAAAATCTTGTTAGACTACTTGGATATTGTGTTGAGGGGGCATACAGGATGCTTGTGTATGAATATGTTGACAATGGGAATCTAGAACAGTGGTTGCATGGGGATGTTGGACCTGTAAGCCCCATAAAGTGGGATATCCGAATGAAAATTATATTGGGCACAGCAAAAGGATTGGCCTATCTTCACGAGGGTCTTGAACCAAAAGTAGTCCACCGAGATGTGAAATCAAGCAACATACTCCTTGATCGCCAATGGAACCCAAAGGTTTCTGATTTTGGACTTGCTAAGCTTTTGTCTGCTGATCATAGTTATGTCACTACTCGAGTGATGGGGACATTTGGTTATGTTGCACCAGAGTATGCGTGCACTGGAATGCTGACTGAGAAGAGTGATGTGTATAGTTTTGGGATACTTATCATGGAAATAATTACTGGAAGAAGTCCTGTTGATTATAGTAAACCACAAGGAGAGGTTAATTTAATAGAGTGGTTGAAAAGTATGGTTGGAAATCGAAAATCTGAGGAAGTAGTAGATCCCAAGCTTGCTGAAAAACCATCTTCAAAGTCTCTTAAACGAGCTTTGTTGGTTGCTCTTCGATGTGTTGACCCTGATGCAGCAAAGAGGCCTAAAGTAGGACATGTGATCCACATGCTCGAGGCTGAGGACCTCTTATCCCGTGATGATCAAAGGATTGGGGGAGAATCTTCCCGTTCCCATCGTGATTATCAACTAGAGGATAAGGACTCAAGATTAGACAACAGGCAGATAGGTGGAGAGATAACTGATCAAAGTGAAGATGATAATACTAGTAGTAGATATCACCCTCAGCCCAGTAGATATAGATAATTGTAGTATAATGACTGCAAAGTAATGTGTCATATTATTTATTTTTACTTGAATGATGAAAGAAGCAATTAGTTATCCCCCCTCTATTTTCATAATGTCCCCAGTTGTTACCTACCTTGATCTGGGATTCTTTTGTACACTAATTCATTGATATAAAATTCAACATTGTGTTTGTGTTTACAA 1727 0.4551 MSVYDAAFVDTQLSKRTSILGLRLWVVIGVLVGSIIVITLFLLSLCLTSRRRHHNKPCRAPAPTPTPTPPISKEILEIVHVPPPPPPPKALYSSGESRLAASVCETTSSRDSGPVGPQVSHLGWGRWYTLRELEAATNDFCEHNVIGEGGYGIVYRGLLPDATKVAVKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNGNLEQWLHGDVGPVSPIKWDIRMKIILGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRQWNPKVSDFGLAKLLSADHSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIITGRSPVDYSKPQGEVNLIEWLKSMVGNRKSEEVVDPKLAEKPSSKSLKRALLVALRCVDPDAAKRPKVGHVIHMLEAEDLLSRDDQRIGGESSRSHRDYQLEDKDSRLDNRQIGGEITDQSEDDNTSSRYHPQPSRYR 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01993 474 CDD STKc_IRAK 146 412 - -
Pste6g01993 474 FunFam Probable serine/threonine-protein kinase At1g01540 120 215 - -
Pste6g01993 474 MobiDBLite consensus disorder prediction 419 462 - -
Pste6g01993 474 SMART serkin_6 140 411 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01993 474 SUPERFAMILY Protein kinase-like (PK-like) 115 412 IPR011009 -
Pste6g01993 474 Gene3D Phosphorylase Kinase; domain 1 119 215 - -
Pste6g01993 474 Pfam Protein kinase domain 142 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01993 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Pste6g01993 474 PANTHER OS01G0323000 PROTEIN 8 433 - -
Pste6g01993 474 ProSiteProfiles Protein kinase domain profile. 140 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01993 474 MobiDBLite consensus disorder prediction 419 474 - -
Pste6g01993 474 ProSitePatterns Protein kinases ATP-binding region signature. 146 168 IPR017441 GO:0005524
Pste6g01993 474 FunFam Putative receptor-like serine/threonine-protein kinase 216 425 - -
Pste6g01993 474 Gene3D Transferase(Phosphotransferase) domain 1 216 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01993 Pste-Chr6 9313245 9316271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01993 26 412 Trihelix Transcription Factor Family AT5G38560 42.640 7.17e-97 304
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pste6g01993 Pkinase 1.9e-46 CL0016