Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01991 CGCGAACGAAACGCACGACAAGAACAACAGCACACAGTGACACATACAAAGGTTGTTGGAAATCCCCGAAGCAGAAACAGAGTTGGGAACACGAAACACACTAAAGGAATCGAATCGAGGTTACGGTTTCGGTCTTGATGGTGTCGGTGAACCCTAACCCGGCTCAAGGATTTTATTTCTTCGATCCTTCCAATATGGCACTTCCGGGCGTCAATAATCTTCCCCCGCCGCCTCCTACGGCCGCTCCCGCCACCGCTTCTGTCGCCCTCGAGGATGCGAATAAGAAGATCCGGAAACCCTACACGATTACCAAGTCCAGGGAGAGCTGGACCGAGCAGGAGCACGACAAATTTCTGGAAGCTCTCCAATTATTTGATCGGGACTGGAAAAAGATTGAGGCATTTGTTGGTTCGAAAACAGTTATCCAGATACGAAGTCATGCACAGAAGTATTTTCTTAAAGTTCAGAAGAATGGAACAAGTGAACATGTACCTCCTCCTCGGCCTAAGAGAAAAGCTGCTCATCCATACCCTCAAAAAGCTCCCAAAAGCACTCCTACTGTATCCCAGGTAATGGGCCCCCTGCAATCATCATCGGCTTTCATTGAACCTGCATACATTTATAGCCCAGATTCTTCATCTGTGCTTGGAACACCAGTTACTCGCATGCCTTTGTCATCTTGGAATTATAATGCTACACCACCACCAGTCAACGTGCCACAAGTGACTAGAGATGACATGGGATTGACTGGAGCTGGACAAGCTGTCCCTCATAATTGTTGCTATAGCAGTAGTAATGAGAGCACCCCTCCAACTTGGCCTAGTAGCAAAAGGATTAATCAAGTAATGCCAGATTTTGCACAAGTCTACAGTTTCATTGGCAGTGTATTTGATCCAAATTCCACTAATCACTTACAGAAACTAAGACAGATGGACCCAATAAATGTGGAAACGGTATTATTGTTGATGAGAAACCTCTCCATCAATTTAATGAGTCCCGAGTTTGAGGATCATAAGAGGCTGCTTTCAACATATGATACCGACTCTGATAAGTCGAAGTATGTTAATATTTGCAGCAAATCCCTCACTAATAAATCTGAGAGTGCTGTTCTATCTGCTTAGGATGTTGCCAGTGGTTTTCGCCGAGGAGTGTTTTCAATATATTTTCTGAATGCACATAAAGTCGAAGCAAGGGAGAAAAGACAAAAAAAGGTTTTGCTAGAAGGAAGTGTAGCATCTAGATGCCTGCATATGTAAATAACACGTGTGTGTATATACACACACACATACCCATACACCTTTTGGATTGAGTTTTTGTTTGTTTTAGGTTCCATTAGTCACGTAGATGTGCTGGTGTTTTGTGTATATCTTTTGAAGATGATTGTCCTTGGAATGCAGGACAATGAGTCCTGTTAGGTCACTACTGGAGGCTATACTGTACAGTCTGTTGAGTGCTTCTGTGTGTTATGCTGTGAAGCTTAGAATTACTATAAATAGCGGTGCTAGGACATAGGGTGCCGTTTGTCTTGTATATAAAGCAATAAACAGTGTATATAAGTTTCTCCTTTTCATGCATG 1576 0.4327 MVSVNPNPAQGFYFFDPSNMALPGVNNLPPPPPTAAPATASVALEDANKKIRKPYTITKSRESWTEQEHDKFLEALQLFDRDWKKIEAFVGSKTVIQIRSHAQKYFLKVQKNGTSEHVPPPRPKRKAAHPYPQKAPKSTPTVSQVMGPLQSSSAFIEPAYIYSPDSSSVLGTPVTRMPLSSWNYNATPPPVNVPQVTRDDMGLTGAGQAVPHNCCYSSSNESTPPTWPSSKRINQVMPDFAQVYSFIGSVFDPNSTNHLQKLRQMDPINVETVLLLMRNLSINLMSPEFEDHKRLLSTYDTDSDKSKYVNICSKSLTNKSESAVLSA 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01991 327 Gene3D - 64 111 - -
Pste6g01991 327 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 56 110 IPR017930 -
Pste6g01991 327 CDD SANT 63 106 IPR001005 -
Pste6g01991 327 MobiDBLite consensus disorder prediction 110 144 - -
Pste6g01991 327 SMART sant 60 108 IPR001005 -
Pste6g01991 327 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Pste6g01991 327 NCBIfam myb-like DNA-binding domain, SHAQKYF class 59 108 IPR006447 GO:0003677
Pste6g01991 327 FunFam protein REVEILLE 6 isoform X1 63 111 - -
Pste6g01991 327 SUPERFAMILY Homeodomain-like 55 111 IPR009057 -
Pste6g01991 327 ProSiteProfiles SANT domain profile. 59 112 IPR017884 -
Pste6g01991 327 Pfam Myb-like DNA-binding domain 61 106 IPR001005 -
Pste6g01991 327 PANTHER SWI/SNF COMPLEX-RELATED 37 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01991 Pste-Chr6 9291201 9297252 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pste6g01991 Myb_DNA-binding 2.7e-11 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01991 6 9291201 9297252 Pste6g01991 6 9291201 9297252 ECH
Pste6g01991 6 9291201 9297252 Pste5g01314 5 8506171 8511740 ECH
Pste5g01314 5 8506171 8511740 Pste6g01991 6 9291201 9297252 PCT