Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01977 atggatcgacgcccaaggaaaagagcgagattaggctgggacatccctgaggtccccaaggctcaggtaggattgttttgtggacaagatgttggaactatttcaagctatgctccttcaaggggtccctcagaacataccactagttctctatttgttgagccagttgctcgtaatggttctcccccttggcgtgatgatgacaaagatgggcattacatgtttgcgcttggagaaaatttaacttctcgctataagatacatagcaaaatgggtgaaggaacttttggacaggtcttagaatgctgggacagagaaaggaaggaaatggttgccataaaaattgtccggggaataaagaagtatcgagaagctgcaatgatagaaattgaagtgttgcaacagcttggtaaacatgataaaggaggcaatcgttgtgtgcaaatacggaactggtttgactatcgtaatcatatctgtattgtgtttgagaaacttggaccaagcttatacgattttcttcggaaaaacaattatcgctcatttgccattgatcttgtccgtgagattggcagacaactattggaatttatgcatgatttgcgcatgattcatactgacctgaagcctgaaaacatactgttagtttcaccagagtatgtcaaagttccggactacaagagttcatctagatcaccaagttcctatttcaagagggttccaaaatcaagtgctataaaggttattgattttggaagcaccacatatgagcgagaagatcagaattacattgtgtcaacccgtcattatagagctcctgaagttatccttggacttggctggagctatccctgtgatatatggagtgtgggatgtatattggttgagttatgcactggtgaagccttgtttcagactcatgaaaatttagagcatctggcgatgatggaaagggtactcggtcctttgccacagcacatgttgaagagtgtcgaccggcatgctgagaagtatgttagaagaggtagattagactggcctgagggggcaacctcaagggagagtatcaaagctgtaatgaagcttcctaagctacagaatcttgtaatgcagcatgtagatcattctgctggcgatctcatacatctcttgcaggggttgcttagatatgaaccttctgaaagacttacggccaaggaagctcttagacattccttctttatgagagacccttctaagagatga 1245 0.0 MDRRPRKRARLGWDIPEVPKAQVGLFCGQDVGTISSYAPSRGPSEHTTSSLFVEPVARNGSPPWRDDDKDGHYMFALGENLTSRYKIHSKMGEGTFGQVLECWDRERKEMVAIKIVRGIKKYREAAMIEIEVLQQLGKHDKGGNRCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNNYRSFAIDLVREIGRQLLEFMHDLRMIHTDLKPENILLVSPEYVKVPDYKSSSRSPSSYFKRVPKSSAIKVIDFGSTTYEREDQNYIVSTRHYRAPEVILGLGWSYPCDIWSVGCILVELCTGEALFQTHENLEHLAMMERVLGPLPQHMLKSVDRHAEKYVRRGRLDWPEGATSRESIKAVMKLPKLQNLVMQHVDHSAGDLIHLLQGLLRYEPSERLTAKEALRHSFFMRDPSKR 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01977 414 Pfam Protein kinase domain 85 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01977 414 PANTHER SERINE/THREONINE-PROTEIN KINASE DOA-RELATED 2 411 - -
Pste6g01977 414 SUPERFAMILY Protein kinase-like (PK-like) 72 409 IPR011009 -
Pste6g01977 414 Gene3D Transferase(Phosphotransferase) domain 1 139 407 - -
Pste6g01977 414 ProSiteProfiles Protein kinase domain profile. 85 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01977 414 CDD PKc_CLK 72 407 - -
Pste6g01977 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 203 215 IPR008271 GO:0004672|GO:0006468
Pste6g01977 414 SMART serkin_6 85 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01977 414 Gene3D Phosphorylase Kinase; domain 1 72 165 - -
Pste6g01977 414 FunFam Serine/threonine-protein kinase AFC2 161 407 - -
Pste6g01977 414 FunFam Serine/threonine-protein kinase AFC2 72 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01977 Pste-Chr6 9175481 9179269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01977 83 407 MAP Kinase Gene Family AT5G19010 29.155 2.86e-24 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CLK Pste6g01977 Pkinase 8e-47 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01977 6 9175481 9179269 Pste6g01977 6 9175481 9179269 ECH