Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01976 CTTTAACCAAAGTCAGCGCCTTCTTTTGTCTCTCTCTCAGCAGGGTACACGCCAGACATCCTCAGACCCTGTCTCTACGGTTATGGATGCCGATTGGGATCTCCACGCCGTCGTCAGAGGTTGCACCACCACTTCCTCCGCCGTCACCACCACTACCACCTCCTCCTCTGTTTCTTCCTCTGGCTTTAGTGCTTCTATCCCACCTTCAACTTCTTCCATCTTTTTCTCTGTTTACAACCCTGCTGAACAAGGAGGCCAAGTTTTCTCCCTTTTAGAGAACCCCTTTGAAGAAAGGCTTTCCAATTCCATTGAAGAGCTTCATGACCTCTGCAAGCCTTTCTTCCTCAAACCACACCCTCAATCTTTTCAAACATCTTCTCCTCTCTCTTCCTTTTCTTATTCTTCTGCGCCCAAATCACCTCACAAACAGCAGCAGCAGCAACAAAAGCAGCCTCACCGTGCCGGTTCCGCCACCTCCTCACGATCCAAAAGAAGGAAGAACCAGATTAAGAAGGTTTGTGAAGTGGCCACTGAGAACCTCTCCTCTGACATATGGGCTTGGAGGAAATATGGTCAGAAACCCATCAAAGGATCACCATATCCAAGGGGATATTACAGATGTAGCAGCTCAAAAGGATGTTTAGCTAGGAAACAAGTGGAGAGGAACAGATCCGACCCAACAATGTTCATAGTCACATACACAGGTGAACACAACCACCCTGCTCCTACTCATAAAAACTCTCTTGCTGGTTCAACGCGCCACAAACCTCAAACCGCCACTTCCGAAGACACTGCCACAAAGAAACCTGTCTCTCCTTCCACCTCAGGAGTGGAAGAGGAGGTGGCACAGCACAGTGCAAAGTCGGAGAGCACAGAGGAGGAAGACATGGAGGATCTGATGAGAGATGATGAGGAACCAAATGAATTTGGCATAACAGAAACGGTGGTAACAGATGATTTCTTTGAAGGTTTAGAGGAACTGACAGGATCTGCCACTGACCCCTTTACAGCAAGTAGTAGCATTGATCGGTGGCCACTGGCCAATAATGCTACCACTGCCGCTGGTGGTAGATGACTCATGCTTTTCATTGCAGAGAATAGGAACTTTTTTTTCTTTGAGGGACAGAGGATAACTGGTTGGTTCATTTTGGAGGAATCTTAACTACCAATGCTTTGTGAAGTGGAAGAAACGTTCTTCTAAAAGTGTATAGTGAAAGTGTAGATTAGGAATTTAAATTTTTTGTCAAACTTAGTTATTATAACTTATTAGCCATACCTCTGTTAATGTGAAATCAATTCGTTTCAGCATCCTTTCCTTTGCGTCCATGTAATAATTTAATCAAGTTGGTTTGATTTTACAATTGGTTCATTGGTTGTGATAAATTTCCTAACACTTTTTGCATTAACTTTTTTCTGCCAATGATGAGTATCGTGTGACTATGATATAAAGAACCCTAATTGTTAAGTAGCTATTCCTATTGAGGTATGCAGTATCTCAACCACAAAACCTCTAGCCCCAAATGGATTCCAGGGCAGGCACTGTGAGTGTCCAG 1553 0.4437 MDADWDLHAVVRGCTTTSSAVTTTTTSSSVSSSGFSASIPPSTSSIFFSVYNPAEQGGQVFSLLENPFEERLSNSIEELHDLCKPFFLKPHPQSFQTSSPLSSFSYSSAPKSPHKQQQQQQKQPHRAGSATSSRSKRRKNQIKKVCEVATENLSSDIWAWRKYGQKPIKGSPYPRGYYRCSSSKGCLARKQVERNRSDPTMFIVTYTGEHNHPAPTHKNSLAGSTRHKPQTATSEDTATKKPVSPSTSGVEEEVAQHSAKSESTEEEDMEDLMRDDEEPNEFGITETVVTDDFFEGLEELTGSATDPFTASSSIDRWPLANNATTAAGGR 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01976 330 SMART WRKY_cls 154 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste6g01976 330 FunFam WRKY transcription factor 22 138 208 - -
Pste6g01976 330 SUPERFAMILY WRKY DNA-binding domain 149 215 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste6g01976 330 MobiDBLite consensus disorder prediction 212 254 - -
Pste6g01976 330 ProSiteProfiles WRKY domain profile. 149 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pste6g01976 330 MobiDBLite consensus disorder prediction 98 142 - -
Pste6g01976 330 Gene3D WRKY domain 139 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pste6g01976 330 MobiDBLite consensus disorder prediction 98 130 - -
Pste6g01976 330 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 303 IPR044810 GO:0003700
Pste6g01976 330 MobiDBLite consensus disorder prediction 208 280 - -
Pste6g01976 330 Pfam WRKY DNA -binding domain 156 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01976 Pste-Chr6 9161724 9163741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01976 1 329 WRKY Transcription Factor Family AT4G01250 48.424 1.10e-84 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pste6g01976 WRKY 6.3e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01976 6 9161724 9163741 Pste4g02823 4 19849757 19851548 ECH
Pste6g01976 6 9161724 9163741 Pste6g01976 6 9161724 9163741 ECH
Pste6g01976 6 9161724 9163741 Pste5g01289 5 8295081 8297038 ECH
Pste6g00804 6 3090607 3095432 Pste6g01976 6 9161724 9163741 ECH
Pste5g01289 5 8295081 8297038 Pste6g01976 6 9161724 9163741 PCT