Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01916 TATTTGTCTGACACACTCTCTCTTCTCTCCCTCACCGTTTCACTTTTGTGTAATAAACCATTTCAAAAGGGAAACCGTTTTCTCCTTTTTTTCGTTTTTGGACCTTATATTGGACACATGAAGGATTCCAATTCGGATCTGTTTGAACCGGTCGTGGCGATGGAGTCTGAGTGGTCTCGCGGCGGTGGCAGCGGCGCCACCTCCGACGCCGATTTCGCCTTCGCCTTCAACGACAGTAACTTCTCCGACAGGGTTCTCCGGATCGAGATCATGTCCGATTCTGTCGACGCCCGACCCGATTCCGACTCCTGCGCCACCATTGCCGACTGGGCGCGCCACCGCAAACGCCGTCGCGAGGATATAAAAAAGGATAACGGTAGCGGTGCGGATCTTGCTTCGGTGCCTGACGAGCAAGATTTGAACGGAAATCAGCCTGACGCGGAGGAGTGTGAAAATCAAGACGAGGAGACTGATGCGATGGTTGAAGAACCCAATTCTGGTGATGAAGCTACGAATAGTAATGATTCAGACTGGAGCATGGATTGCTCTACAGGTGCAGTTGTTAGAGTTAAGACGCTGCATATCAGTTCTCCTATTTTGGCTGCTAAGAGTCCTTTCTTCTATAAGCTTTTCTCAAATGGAATGAGGGAGTCTGAGCAAAGACATGTCACTCTCAGAATTAATGCCTCTGAAGAAGCTGCTCTCATGGAACTACTGAATTTTATGTACAGTAATACTTTGACCACTACTACAGCACCTGCTGTGCTGGATGTGTTGATGTCCGCTGATAAATTTGAAGTTGCTTCATGCATGAGATACTGCAGCCGGTTATTAAGGACTATGCCTATGACACCTGACTCTGCATTGCTTTATTTGGAACTTCCTTCCAGTGTCTTAATGGCTGATGCAGTCCAACCATTGACTGATGCTGCAAAGCAGTATCTTGCTGGTCGATACAAGGATATAACCAAGTTCCAGGAAGAGGTTATGGGCTTGCCCCTAGCCGGAGTTGAGGCCATACTGGCTAGTGATGATCTCCAGGTTGCATCAGAAGATGCTGTATATGATTTTGTGTTGAAGTGGTCTCGACAGCAGTTCCCTAAACTGGAAGAAAGGCGAGAAGTCTTGGGGGCCCGGCTTGCACGTTTGATCCGCTTCCCTTACATGACCTGCCGAAAGCTTAAGAAGGTCTTGACCTGTTCAGACTTTGACCATGACGTTGCATCCAAGCTTGTACTTGAGGGCCTATTTTTCAAGGCCGAGGCCCCGCACCGCCAACGCTCACTAGCTGCAGAAGACTCTGCTTCTTCGAACCGTCGTTTTGTGGAGAGGGCATACAAGTATCGCCCTGTGAAGGTGGTAGAATTTGAACTTCCCCGGCAGCAGTGTGTGGTTTTCTTGGATCTGAAGCGGGAGGAGTGTGCCAATCTGTTTCCATCTGGCCGGGTTTATTCTCAGGCATTCCATTTGGGTGGACAAGGTTTTTTCCTTTCAGCACATTGCAACATGGATCAACAAAGCTCTTTCCATTGCTTTGGGCTGTTTTTGGGAATGCAGGAAAAGGGCTCAGTAAGCTTTGCAGTTGACTATGAATTTGCTGCAAGGTCTAGGCCAACAGAGGAATTTGTCAGCAAGTACAAAGGCAACTACGTGTTCACAGGGGGAAAGGCTGTAGGCTATAGAAACTTGTTTGCTATTCCATGGACTTCGTTCATGGCCGAGGATAGTCTTTACTTCATCAATGGTGTACTCCACCTTAGAGCCGAGCTCACCATCAGACACTGACCCCTATTCTTGTTGTAAACTTTCTATTCCAATTTGTAGCCCTGTTCTTTTTTAGCTCTCGATTTCTCATTTTCTTTTGACATGTAATGTTTCAAATTCAAACGCTTAATATACAAGCTAGTGTTGCATTTGTATGTTATTGAGTTGAGAAGATAACTAGGACCGTGATATATATTATCTATTTTCTAATAGTTAAGTGAATCTGCC 1992 0.4649 YLSDTLSLLSLTVSLLCNKPFQKGNRFLLFFVFGPYIGHMKDSNSDLFEPVVAMESEWSRGGGSGATSDADFAFAFNDSNFSDRVLRIEIMSDSVDARPDSDSCATIADWARHRKRRREDIKKDNGSGADLASVPDEQDLNGNQPDAEECENQDEETDAMVEEPNSGDEATNSNDSDWSMDCSTGAVVRVKTLHISSPILAAKSPFFYKLFSNGMRESEQRHVTLRINASEEAALMELLNFMYSNTLTTTTAPAVLDVLMSADKFEVASCMRYCSRLLRTMPMTPDSALLYLELPSSVLMADAVQPLTDAAKQYLAGRYKDITKFQEEVMGLPLAGVEAILASDDLQVASEDAVYDFVLKWSRQQFPKLEERREVLGARLARLIRFPYMTCRKLKKVLTCSDFDHDVASKLVLEGLFFKAEAPHRQRSLAAEDSASSNRRFVERAYKYRPVKVVEFELPRQQCVVFLDLKREECANLFPSGRVYSQAFHLGGQGFFLSAHCNMDQQSSFHCFGLFLGMQEKGSVSFAVDYEFAARSRPTEEFVSKYKGNYVFTGGKAVGYRNLFAIPWTSFMAEDSLYFINGVLHLRAELTIRH 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01916 594 SUPERFAMILY TRAF domain-like 481 592 - -
Pste6g01916 594 SMART BTB_4 182 282 IPR000210 GO:0005515
Pste6g01916 594 SMART BACK_2 297 399 IPR011705 -
Pste6g01916 594 Pfam BTB/POZ domain 191 279 IPR000210 GO:0005515
Pste6g01916 594 MobiDBLite consensus disorder prediction 142 163 - -
Pste6g01916 594 SUPERFAMILY POZ domain 191 278 IPR011333 -
Pste6g01916 594 FunFam BTB/POZ domain-containing protein POB1 173 303 - -
Pste6g01916 594 FunFam BTB/POZ domain-containing protein POB1 316 420 - -
Pste6g01916 594 CDD BTB_POZ_ZBTB_KLHL-like 187 265 - -
Pste6g01916 594 Pfam BTB And C-terminal Kelch 305 397 IPR011705 -
Pste6g01916 594 Gene3D Potassium Channel Kv1.1; Chain A 171 303 IPR011333 -
Pste6g01916 594 ProSiteProfiles BTB domain profile. 182 251 IPR000210 GO:0005515
Pste6g01916 594 PANTHER OS02G0260700 PROTEIN 57 593 IPR045890 -
Pste6g01916 594 MobiDBLite consensus disorder prediction 115 178 - -
Pste6g01916 594 Gene3D - 314 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01916 Pste-Chr6 8850642 8854806 Wgd