Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01902 CCAAGCGCTTTCCCTCGTTTTTTAAGAGAGAGAAAGTAGAGAGAGAACTCGCCTAATTGCTTTTCCAAACCTTAATTTCAGGATACTTCCAAGCTACCACCACCATTTGTTCTTCCTTTTTCTGTTTTTTTTATTCAGGGATTCTCGTTTTCGTTTTTTTAACGTTTCGATGTGTTTTAGTTTTCCCATATGAAGCAGCTGGAAAACGTAATAAGAGAAGAGAAGGGGTATTTTGGATCAGGGGTAAAGCTTGTAAATTGTAAAAAAGGGAGGTTCAGGTAGCAAGTTTAAGAGTCTCAACTCTGTAGTCCTCTCATTCTCTTACCATGAAAGTGCAAAAGAATTTTTTATTGGAGGGCTTTTTTGTCATTATGTTATCGGATTGTCCTGTTGGGTTTGATTTGTTATGTAATCGTTGTTAGTTTGTGTTAATCACTTTCTATCCATTGTGGGGTTACAAAAAGACATGGTTGACCCTCTTCCATTCTGTCATTGACTGACTATTCGATTTGTTCGTGGTTGTTTTTGCAAGATAAGTGTAATATTTGTATGGTGCTGCAGAGGTTTATTTTGTAAATATGTTTGAATGCTAACTAGGCATTGCTTAGTAACCAAAATCTGTCACTGTTATTATACTGTTGTTAGAAGCCCAGAACCTTTGATTTATTGTTGTATTTCATTCCTGCTTCCAAGGTTAATATTGTTTATTAATTATGAAGTAATAATTTTGAAACGTTGGAATCTCTCTTCCTTTATGCTTCTCTTTTAGGGGATCGGGGGCTTTGAGGATTGTGTTGGCTTAGAAATGTATATGCCTTAGTATATGATATTTTAGGCTTCTTTGCAACATTTTCTTGCTTACAGCATAGCTTCTTTGAATGCAGTTGAATAACGTATTGGGGCATATTTGACTGGTGATTTTCTTTTGGTGCCTACCTCATGGGAAACAGTGAGGAAGGGAAATCTATTAAGACTGGAAGTCCTTCTTCACCAGCAACAACTGATCAGACCAACCAGCCTAGCATTCATGTCTATCCTGATTGGGCTGCCATGCAGTATTATGGGCCAAGAGTCAACATTCCACCATACTTCAACTCGGCCGTGGCTTCTGGTCATGCTCCACACCCATACATGTGGGGGTCACCACAGACGGGGATGGATAATTTGTCAACTTGTTTCTTCCAGGCAATGATGCCACCTTATGGGCCACCGTATGCAGCATTTTATTCTCATGGAGGGGTTTATACTCACCCTGCAGTTGCTATTGGGCCACATCCACATGGTCAAGGAGTTCCATCTCCACCTGCTGCTGGGACTCCTTCAAGTGTAGAATCACCAACCAAATTATCTGGAAATACTGATCAAGGTTTAATGAAGAAATTGAAAGGGTTTGATGGACTTGCGATGTCAATAGGCAATTGCAATGCTGAGAGTGCTGAGCGTGGGGCTGAAAACAGACTGTCGCAAAGTGCGGATACTGAGGGTTCAAGCGATGGAAGTGATGGCAACACTGCAGGGGCTAATAAAATGAGAAGGAAAAGAAGCCGAGAGGGAACGCCAACCACTGGTACAATTCATTCCCTGTTGCATCTTGATGAACAAAAGAGTTCACTTGGATCACACTTATACTTTTTGTGTCATGGAGAAGGGAAGACTGAGACTCAAGAGGGGTCAGTTTCAAAAGAGACTGCATCTTCCAGAAAGATTATGCCAGCTACCCCAGCTAGTGTTGCAGGAAATTTAGTTGGACCTATAGTTTCTTCAGGAATGACCACAGCACTGGAGCTTAGGAACCCTTCGACTGTTCATTCTAAGGCAAATAACACAAGTGCCCCACAACCTTGTGCAGTTGTGCCTTCTGAAGCTTGGTTACAGAATGAGCGCGAGCTGAAACGGGAGAGGAGGAAACAATCAAACCGTGAATCTGCTAGAAGGTCCAGGCTGAGGAAGCAGGCTGAGACTGAAGAATTGGCACGAAAAGTTGAGATGTTATCTACTGAGAATGTGTCACTGAAGTCAGAAATAACTCAATTGACTGAAAGTTCTGAGCAGATGAGGATGGAAAATTCTGCACTGAGGGAAAAACTGAGAAATACTCAACTGGGACAAACTGAAGAGATACTTTTGACCAGCATTGACAGCAAGAGGGGGGCTACACCTGTAAGTACAGAAAACTTGCTATCAAGAGTTAATAATTCCAGTTCTAATGATAGAACTGCAGAGAATGAGAATGATTTCTGTGAGAACAAACCAAATTCTGGTGCAAAGCTGCATCAACTACTGGATGCAAATCCTAGAGCTGATGCTGTGGCAGCTGGCTGAAACCAGTACTTGCTCTGGCTGATTATGTAATTTTGGCATATTACAAGCCCAAAATTGCAACTTGGTGCTAACAGTTTTCAGAGGGATGGATCAGCTGAGTTTTTCAATCTAAATCCATCTATAGACCAGAACTAATTCTTTGGTTGTCAGTTTCTTAGGACATGAACTCTGTATTTTATTAGATTTCACAGAAATGGATGACAACTTTAAAAGTTTGTAAATTGAAGAGTATTAGGGATTTAGTTTAGACTTTAAGAGAGGGTTGTCAACCGCTGTATAATTATTTGGGTGTGAACTTTCTAATAGTATCCGAGATAAGGTATTTTGACTTTTTGTTAATTTGGTTTCCATACTTACTCGTGCTGTGAATGTGGGTTACCTTGTACACGTGTTCGTCACTAATCAGTGTGTATTTTGGATTCAATTAATTCTAG 2756 0.4049 MGNSEEGKSIKTGSPSSPATTDQTNQPSIHVYPDWAAMQYYGPRVNIPPYFNSAVASGHAPHPYMWGSPQTGMDNLSTCFFQAMMPPYGPPYAAFYSHGGVYTHPAVAIGPHPHGQGVPSPPAAGTPSSVESPTKLSGNTDQGLMKKLKGFDGLAMSIGNCNAESAERGAENRLSQSADTEGSSDGSDGNTAGANKMRRKRSREGTPTTGTIHSLLHLDEQKSSLGSHLYFLCHGEGKTETQEGSVSKETASSRKIMPATPASVAGNLVGPIVSSGMTTALELRNPSTVHSKANNTSAPQPCAVVPSEAWLQNERELKRERRKQSNRESARRSRLRKQAETEELARKVEMLSTENVSLKSEITQLTESSEQMRMENSALREKLRNTQLGQTEEILLTSIDSKRGATPVSTENLLSRVNNSSSNDRTAENENDFCENKPNSGAKLHQLLDANPRADAVAAG 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01902 460 MobiDBLite consensus disorder prediction 122 141 - -
Pste6g01902 460 Gene3D - 317 371 - -
Pste6g01902 460 Coils Coil 341 382 - -
Pste6g01902 460 Pfam G-box binding protein MFMR 1 107 IPR012900 -
Pste6g01902 460 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 430 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pste6g01902 460 Pfam Disordered region downstream of MFMR 141 293 - -
Pste6g01902 460 MobiDBLite consensus disorder prediction 1 27 - -
Pste6g01902 460 CDD bZIP_plant_GBF1 319 367 IPR045314 GO:0003700|GO:0006355
Pste6g01902 460 MobiDBLite consensus disorder prediction 112 144 - -
Pste6g01902 460 SUPERFAMILY Leucine zipper domain 317 372 IPR046347 GO:0003700|GO:0006355
Pste6g01902 460 Pfam bZIP transcription factor 314 376 IPR004827 GO:0003700|GO:0006355
Pste6g01902 460 MobiDBLite consensus disorder prediction 165 213 - -
Pste6g01902 460 FunFam G-box binding factor 3 317 372 - -
Pste6g01902 460 MobiDBLite consensus disorder prediction 403 440 - -
Pste6g01902 460 MobiDBLite consensus disorder prediction 169 191 - -
Pste6g01902 460 MobiDBLite consensus disorder prediction 315 342 - -
Pste6g01902 460 MobiDBLite consensus disorder prediction 403 427 - -
Pste6g01902 460 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 316 379 IPR004827 GO:0003700|GO:0006355
Pste6g01902 460 SMART brlzneu 314 378 IPR004827 GO:0003700|GO:0006355
Pste6g01902 460 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 321 336 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01902 Pste-Chr6 8776746 8781692 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01902 1 459 bZIP Transcription Factor Family AT4G01120 39.957 9.14e-80 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pste6g01902 MFMR_assoc 1.2e-19 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01902 6 8776746 8781692 Pste6g01902 6 8776746 8781692 ECH