Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01881 atggcccttcctccttatagtggcgaaatcgatggtgaaaatctgcctcttgttggtttggatgtgtgtgcgtatggctgttatcatcatcaacatatttcagaagatagcagttgtgcgttggtggtcgtgcccttccgagacgaaaccatccgggataagaaaagggtgaagagaaccgtgtgcattcccatgtataaaagcattgattggccaaggagcagtaggaatagcatatcaaaactccatttcagagatcacatacggacttacactcaaaaatattttgcagctgaacccgtagaagaggcatgggaagacgcaaagagttcagaaagtggtggaggccaagatcaagatcaagatcaagatcaagatcaagatcaagatcaagatcatgatcatgaagatggagtgaggctggttcaacatctaatagcgtgtgcagaagcggtggcatgccgtgacaaatcgcacgcttcaatattactatccgaacttaaagccaatgccttagtgttcggatcctcgttccaaagggttgcctcttgctttgtccaaggactgacagagaggctcagtctgattcaaccgatgggggccatgccacccatgatgaacattatggacgctgcctcggaagaaatggaggaagcgttcaggttggtttacgacctgtgtccgcacattcagttgggacactttgtggcaaattccacagtattggaagcctttgagggtgagagtttcgtccatgtggtggaccttggcatgagtcttggtcttcgtcatggacaccagtggagaggactgatccagagcctgtccaaccgtgcagatggtgaacatgttcgccgcctgcgaatcacgggagtgggcctctgcgacagacttcaatccattggagacgaactctccgtttatgcaaacaatttgggcgttaacatggagttctcactggtgaaaaagaacttggaaaatttgaaagcagaggacatagaggtgaggaaagaagaggttctcgttgtgaacagtattctgcagctgcattgcgttgtcaaggagagccgaggggctttgaattcggtactccaaattattaatgggctagggcccaaagtgatggtgatggtggagcaggactccagtcataacggacccttttttcttggaaggtttatggagtccctgcactattactcggctatattcgactccttggatgttatgctgcccaagtatgacaccaagagggccaagatggagcagttttacttcgctgaagagataaagaacatagtgagctgtgaggggcctttgaggatggagaggcacgagagagtggaccagtggagaaggaggatgagcagggctggctttcaggcacagcctattaagatgcttgctcaggcaaagcactggcttctcaagaacaacatttgtgacggctacactgttgtcgaagagaaggggtgccttgtccttggatggaaatccaggcccattgttgcagtttctacctggaaatgctga 1533 0.0 MALPPYSGEIDGENLPLVGLDVCAYGCYHHQHISEDSSCALVVVPFRDETIRDKKRVKRTVCIPMYKSIDWPRSSRNSISKLHFRDHIRTYTQKYFAAEPVEEAWEDAKSSESGGGQDQDQDQDQDQDQDQDHDHEDGVRLVQHLIACAEAVACRDKSHASILLSELKANALVFGSSFQRVASCFVQGLTERLSLIQPMGAMPPMMNIMDAASEEMEEAFRLVYDLCPHIQLGHFVANSTVLEAFEGESFVHVVDLGMSLGLRHGHQWRGLIQSLSNRADGEHVRRLRITGVGLCDRLQSIGDELSVYANNLGVNMEFSLVKKNLENLKAEDIEVRKEEVLVVNSILQLHCVVKESRGALNSVLQIINGLGPKVMVMVEQDSSHNGPFFLGRFMESLHYYSAIFDSLDVMLPKYDTKRAKMEQFYFAEEIKNIVSCEGPLRMERHERVDQWRRRMSRAGFQAQPIKMLAQAKHWLLKNNICDGYTVVEEKGCLVLGWKSRPIVAVSTWKC 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01881 510 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 120 508 IPR005202 -
Pste6g01881 510 MobiDBLite consensus disorder prediction 106 135 - -
Pste6g01881 510 ProSiteProfiles GRAS family profile. 132 509 IPR005202 -
Pste6g01881 510 Pfam GRAS domain family 141 509 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01881 Pste-Chr6 8701294 8703105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01881 135 509 GRAS Transcription Factor Family AT1G14920 38.442 3.75e-78 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste6g01881 GRAS 2e-107 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01881 6 8701294 8703105 Pste6g01881 6 8701294 8703105 ECH