Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01880 GCAACAATTGCAACGATGGGTTCTTTGATTTGGTGGCTGGTGCTGCCTATTCTCGTGTTCTTTGAGGCTACATCTACAGCACGCGCCACGGACGTGGCTTCGTTCTACCCTCAGCGCGACTTTGATTATTTCGCTTTGGCGTTGCAATGGCCAGCCACTTACTGCCACCGCTCCCAGGGTTGCTGTCCCTCCAATGCCTGCTGCAGAGGCTCCAATTTTCCAACAGTGTTCACCATACGTGAGTATGAGGCTTCAAATGTTATATCTATATGTATGATAGATGGACTCTGGCCTGACTATAATGATGGAACCTGGCCATCCTGTTGCTCTCGATCCAGCTTTGATCCCAAAGAGATATCAACATTGACTGATGCTTTAGAGCAATATTGGCCATCATTGAGCTGTAGCTCGCCATCAACATGCCATGGTGGGAGAGGTTCATTTTGGGCTCATGAGGTGGTTGTTGGAATTAATTATATTAAATTGGTAACCAAACAAAGTGCTCAAAGATTCAAATATATCTTCATTATTAGCAAGAAACATGGCACATGCTCCTATCCTGTGGTTCGAAATGAATATGATTATTTTCTGACAGTTCTTAATGTTTATTTCAAATATAATGTTACAAGCGTTCTAAATGATGCTGGATATGTACCCTCTAATACAGAAAAGTATCCCCTTGGAGGCATTATCGCTGCCATTGAGAATGCTTTTCACGCATCTCCTTTAATAGTTTGCTCAAAAGGTTCTATTGAGGAACTTCGCCTGTGCTTTTATAAGGACTTTCAGCCACGAGATTGTGCTGTTGGATCTGACATTAAAATCGACATGGTTACTTCCAAAAAATCATGTCCCAAATATGTTAGCTTGCCAGAGCCGGTATCAGCGAAGTTTCAGAAAGGAAAGCTTGGCGCAGTGGACTTCAAAGTTGTGTCTCTGATGATGCAGCTCTTTAAGGTTATGGTTGTGTACTTCTATTTAAAAATTGAGGTGACGGTTTTTGGAATTTGGAGCTGTCTCAAGCCTTCTGCCTTGTATTTGGAGTCTGGGTTTTATCATTTTCGCAATCTGAACCTCCAAGTTCCAATCCATTTTGATACAACAAACCTTCAGTGCCTTTCTGTATGGGATGCTCAAAGTTTCATCCTCAGATATGTTCAGACTTCTGCAGACATTTGGAGTTTCATTCTCTCCACCCCAGACACAAATTCTTACATAGCTATGGGATTCTCGATCAATGGCGGCATGGTGGGTTCAAGTGCCATGGTGGGGTGGGTGGCATCAAGAGGAGCCAGTGGAGGGATCAAGCAGTATTATCTTGGTGGGGTCACCACAAATCAGGTGGTTCCCGATAAGGGCAACCTACAGGTTATAGCCAACTCTACCTTCATCACTTTACAGTCCTCTCATCTGTTCATGGTGTTTCAGTTAGAAACTACCACCGAACCTTTGTCCTCGCTGATATTTGCCACTGGATCCACCGGCTTATTCCCTGCGCCACCAAACTTTGCTCTAACTAAACATCTTGACAAGGTGTCCACAAGAATAGACTACTCAAAAGCCAATGTTGGAAGTTCACAGGGGGCTGGCAATTCTTCACAAGTAGATGGAAGTTTAGAAGCAACAGACTCCTGCAGCTCCAAGCTAAACCTCAGTGTTCCTCTTCTCTTTGACACAACCAACCTCAATTGTCTTCCTGTTTGGAATACTCAAGGATTCATCCTCAGATATTCTCAAACTTCTCCAAACATATGGAGTTTCATTCTCTCAGCTCCAAACCCAAATTCTTACATAGCAATGGGGTTCTCTCCCAGTGGAGGCATGGTGGGTTCAAGTGCCATTGTGGGATGGATTTCATCCAGTGGGGCAGGTGGAGGCATGAAGCAGTATTATCTAACAGGACTCACACCAAACCTGGTGGTGCCAGACAGAGGCAACTTAAAAATTCTCAGCAACTCAACCTTCATTACATCACAGTCCTCACGTTTGTACATGACCTTCCAGTTACAAACCAACCAACCTCTGTCCCAGTTGATTTATGCCTTTGGACCTAATGGCATGTTTCCTTCGGCACCAAGTTTTGCGTTAACTCAGCACCAAGACAAAGTCTCCATTACGCTGGATTACGCAACAGGTTCAAGTGCATCAGGAAACTACTCATATATGAAGCTGAAAAGAAGCCATGGAGTGTTGAATATATTGGGATGGGGCATCCTAATCATAATGGGAGCAATAGTTGGTCGCTACTTCAAGGAATGGGATCCATTTTGGTTTTATTTCCATGCTTCAGTTCAATCCCTGGGTTTTCTTCTGGGAGTAATTGGTGTAATTACTGGTCTTGTCTTGAATAATCAACTCCGTGTTGATGTTAGTCTTCACAAGGCACTTGGAATTATCATTTTCGTTCTAGGCTGCCTCCAGATAATGGCTTTGCTTGGGCGACCAAAGAAGGAATCAAAAGTGAGAAAGTATTGGAATGTATACCATCATAACACGGGGAGGATTTTGATTATACTAGCCGTAGCAAACATTTTCTATGGCATCCAATTAGGGAAGGAGGGCAGAGGATGGAATATCGGTTATGGAATTGTTCTTGCCATATTACTCACTATGGCTATTACTTTTGAAACACAACTCTGCAATAGAGACTAA 2652 0.4333 MGSLIWWLVLPILVFFEATSTARATDVASFYPQRDFDYFALALQWPATYCHRSQGCCPSNACCRGSNFPTVFTIREYEASNVISICMIDGLWPDYNDGTWPSCCSRSSFDPKEISTLTDALEQYWPSLSCSSPSTCHGGRGSFWAHEVVVGINYIKLVTKQSAQRFKYIFIISKKHGTCSYPVVRNEYDYFLTVLNVYFKYNVTSVLNDAGYVPSNTEKYPLGGIIAAIENAFHASPLIVCSKGSIEELRLCFYKDFQPRDCAVGSDIKIDMVTSKKSCPKYVSLPEPVSAKFQKGKLGAVDFKVVSLMMQLFKVMVVYFYLKIEVTVFGIWSCLKPSALYLESGFYHFRNLNLQVPIHFDTTNLQCLSVWDAQSFILRYVQTSADIWSFILSTPDTNSYIAMGFSINGGMVGSSAMVGWVASRGASGGIKQYYLGGVTTNQVVPDKGNLQVIANSTFITLQSSHLFMVFQLETTTEPLSSLIFATGSTGLFPAPPNFALTKHLDKVSTRIDYSKANVGSSQGAGNSSQVDGSLEATDSCSSKLNLSVPLLFDTTNLNCLPVWNTQGFILRYSQTSPNIWSFILSAPNPNSYIAMGFSPSGGMVGSSAIVGWISSSGAGGGMKQYYLTGLTPNLVVPDRGNLKILSNSTFITSQSSRLYMTFQLQTNQPLSQLIYAFGPNGMFPSAPSFALTQHQDKVSITLDYATGSSASGNYSYMKLKRSHGVLNILGWGILIIMGAIVGRYFKEWDPFWFYFHASVQSLGFLLGVIGVITGLVLNNQLRVDVSLHKALGIIIFVLGCLQIMALLGRPKKESKVRKYWNVYHHNTGRILIILAVANIFYGIQLGKEGRGWNIGYGIVLAILLTMAITFETQLCNRD 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01880 878 CDD DOMON_DOH 566 699 IPR045266 -
Pste6g01880 878 ProSiteProfiles DOMON domain profile. 566 678 IPR005018 -
Pste6g01880 878 SMART 561_7 722 843 IPR006593 -
Pste6g01880 878 Gene3D - 698 874 - -
Pste6g01880 878 Pfam Ribonuclease T2 family 36 147 IPR001568 GO:0003723|GO:0033897
Pste6g01880 878 Pfam Ribonuclease T2 family 174 262 IPR001568 GO:0003723|GO:0033897
Pste6g01880 878 CDD DOMON_DOH 367 503 IPR045266 -
Pste6g01880 878 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 363 521 - -
Pste6g01880 878 SMART DOMON_3 592 678 IPR005018 -
Pste6g01880 878 SMART DOMON_3 400 487 IPR005018 -
Pste6g01880 878 ProSiteProfiles Cytochrome b561 domain profile. 685 878 IPR006593 -
Pste6g01880 878 ProSiteProfiles DOMON domain profile. 374 496 IPR005018 -
Pste6g01880 878 Pfam Eukaryotic cytochrome b561 723 843 IPR006593 -
Pste6g01880 878 CDD Cyt_b561_FRRS1_like 699 871 - -
Pste6g01880 878 CDD RNase_T2_euk 36 281 IPR033697 -
Pste6g01880 878 Gene3D - 32 289 IPR036430 GO:0003723|GO:0033897
Pste6g01880 878 SUPERFAMILY Ribonuclease Rh-like 34 264 IPR036430 GO:0003723|GO:0033897
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01880 Pste-Chr6 8699213 8716203 Dispersed/Transposed