Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01879 ATGAGCACTCAATTCCAACAAGAACAAGAACAAGAACAACACAACAAAAGAGAATTCAAGGGAGAGCAAGCGGAACAGGAGGAAGAAGAAAGTCATTTGCTACATTCAGAATGTGAGACAATACCATTGTCCTCACCCCACGTATCACCCTCAAAGTGGGAACATGGAAACAAAGAAGAAGAAGAAGAGGAGGAGGACACGGTGTACGCAGCCAAGGACAAGGTCCAGATATTCGACTTGGAGTCCGCCGGAGGCGGGGCGGGGTCCACGGCGGTGCCACCGTTTTCGTGGAGGAAGCTGTGGTTGTTCACAGGGCCAGGGTTGTTGATGAGTGTGGCCTTTTTGGACCCAGGGAACCTTGAAGGGGACCTTCAAGCTGGAGCCATTGCTGGGTACTCATTGCTTTGGTTGTTGATGTGGTCTACCATAATGGGGTTGATCATACAGCTTCTCTCGGCGAGGCTTGGGGTGGCCACAGGGCGGCACCTGGCGGAGCTGTGCCGGGAAGAGTACTCCACTTGGGCCAGGTTGGTGCTTTGGGTCTTGGCTGAGCTTGCTCTCATTGCTGCTGATATTCAAGAGGTTATCGGAAGTGCTATTGCTTTTAGGATTCTCAGCCGCGGGCTTCTCCCCATTTGGGCTGGTGTGATTATCACAGCCATGGATTGTTTCTTCTTTCTATTTCTCGAGAACTATGGAGTGAGGAAGTTGGAAGGTGTATTCGCATTTTTCATTGGAACTATGGGCTTTTCTTTTGCTTGGATGTTCTTTGATACAAAGCCCAGCGAAGAAGAGCTAATGATGGGTCTTTTGATCCCAAGAGTTAATTCAAAAACACTTCGCCAGGCTGTGGAAATTGTGGGATGTGTGATAACTCCACACAATGTGTTTCTTCATTCTGCATTGGTACAATCAAGGGATATTGATATCCGTAACAAAGGCCAGGTTCAAGAGGCTATCAACTACTACTCAATTGAGTCCTCAGTTGCACTTTTAGTCACATTGGTGATCAATCTATTTGTGATAACTGTTTTCGCTAGGGTGTTCTACGGTACAGAACAGGCCAAAGGCATAGGATTGGTCAATGCAGGGCAATATCTTGAGGGCAAGTATGGAGGAGGGTTGTTTCCAATTCTATATATATGGGGTATTGGTTTGTTAGCCGCTGGACAAAGTAGTACCATTACAGGCACGTATGCAGGCCAGTTTATAACTGAGGGTTTTCTTAAGCTCAATATAAAGAAGTGGTTGAGGGCATTAATCACTAGAAGTTGTGCAATTGTTCCAACTATGATTTGTGCAATTGTTTTTAATACATCAGAAGGTTCTTTGGATACCCTGAATGAATGGCTTAATGTAGTCCAAGCAATACAGATTCCTTTTGCACTAATCCCCCTTCTTACTTTGGTGTCCAAAGAGGAGGTCATGGGGAGCTTCAGAATAGGGCCTATAGTAGAGAAAGTGGCTTGGAGTGTTGCTGTGCTGGTAATAATGGTTTATGGATATATGCTATTAGATTTCTTTCTGGATGAAGTAGATGGACTGTTGTTTGGTTTTCTAATGTTCCTTGGCGCTGCAGCATGGATTTCATTTATTATATATCTGCTTCAACATAGTAGTGCCATTTCTTCAATCCTAGTAAGGTCCCCCAATTCCAAAGGCTTTTTCTCTCTTGCTGGGAACTGA 1686 0.4514 MSTQFQQEQEQEQHNKREFKGEQAEQEEEESHLLHSECETIPLSSPHVSPSKWEHGNKEEEEEEEDTVYAAKDKVQIFDLESAGGGAGSTAVPPFSWRKLWLFTGPGLLMSVAFLDPGNLEGDLQAGAIAGYSLLWLLMWSTIMGLIIQLLSARLGVATGRHLAELCREEYSTWARLVLWVLAELALIAADIQEVIGSAIAFRILSRGLLPIWAGVIITAMDCFFFLFLENYGVRKLEGVFAFFIGTMGFSFAWMFFDTKPSEEELMMGLLIPRVNSKTLRQAVEIVGCVITPHNVFLHSALVQSRDIDIRNKGQVQEAINYYSIESSVALLVTLVINLFVITVFARVFYGTEQAKGIGLVNAGQYLEGKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFITEGFLKLNIKKWLRALITRSCAIVPTMICAIVFNTSEGSLDTLNEWLNVVQAIQIPFALIPLLTLVSKEEVMGSFRIGPIVEKVAWSVAVLVIMVYGYMLLDFFLDEVDGLLFGFLMFLGAAAWISFIIYLLQHSSAISSILVRSPNSKGFFSLAGN 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01879 561 NCBIfam Nramp family divalent metal transporter 105 474 - -
Pste6g01879 561 Pfam Natural resistance-associated macrophage protein 121 482 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste6g01879 561 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 23 537 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste6g01879 561 MobiDBLite consensus disorder prediction 1 68 - -
Pste6g01879 561 Coils Coil 9 29 - -
Pste6g01879 561 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 98 476 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste6g01879 561 PRINTS Natural resistance-associated macrophage protein signature 209 228 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste6g01879 561 PRINTS Natural resistance-associated macrophage protein signature 283 306 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste6g01879 561 PRINTS Natural resistance-associated macrophage protein signature 390 409 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste6g01879 561 PRINTS Natural resistance-associated macrophage protein signature 179 205 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste6g01879 561 PRINTS Natural resistance-associated macrophage protein signature 452 471 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste6g01879 561 PRINTS Natural resistance-associated macrophage protein signature 418 435 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste6g01879 561 PRINTS Natural resistance-associated macrophage protein signature 234 255 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste6g01879 561 Hamap Divalent metal cation transporter MntH [mntH]. 86 508 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pste6g01879 561 MobiDBLite consensus disorder prediction 10 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01879 Pste-Chr6 8692505 8695737 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01879 62 540 Inorganic Solute Cotransporters AT1G47240 72.651 0.0 731