Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01878 CCACAGCCAAAGAAGAAACAGTGAAAAGGTTGTGTCCTAAAGACAGTTAGTTAGGATTTTGAGTGTCTCTTTTCTCAACAACACACAGCCGTCACTGCTAATCACCCAACAATGCCGACGGGGATGCCCACGGCCAACTCCTCCGCCGGCCACGACGACCACAGCTGGCTCTGGGTGCAGATCAAGGCGGAGGCGCGCCGCGACGCCGAGTCGGAGCCAGCGCTCGCCAGTTACCTCTACTCCACCATCCTCTCCCACTCCTCTCTCGAACGTTCTCTCTCCTTCCACCTCGGAAATAAACTCTGTTCCTCAACGCTTCTCTCCACGCTCCTCTACGACCTCTTCCTCAACTCCTTCGCCACCGATCCCGACCTCCGCTCCGCCGCCGTCGCCGACCTCCGCGCCGCACGCGAACGGGACCCTGCCTGCGTCTCCTACTCTCACTGCCTCCTCAATTACAAAGGCTTCCTCGCCTGTCAGGCGCACCGTGTGGCTCACCTGCTATGGAGGCAGTCGCGGCGGCCTTTGGCGTTGGCACTGCACTCTCGGATCGCAGACGTGTTCGCAGTGGACATTCATCCAGCAGCAAGGATTGGGAAGGGGATTCTGTTCGACCATGCCACTGGGGTAGTGGTGGGGGAGACAGCAGTTATAGGTAACAACGTCTCCATTCTGCACCATGTTACGCTTGGTGGGACTGGCAAGGTTGGTGGTGACAGACATCCTAAGATTGGAGATGGGGTGCTTATTGGCGCTGGTGCTACCATTCTCGGAAATATTAAGATTGGGGAAGGTGCAAAGGTTGGTGCTGGCTCTGTCGTTTTGATTGATGTGCCACCACGGACCACGGCAGTTGGTAATCCAGCCAGGTTGGTTGGTGGGAAGGAGAAGCCCTCTAAGCACGAGGATGTGCCTGGGGAGTCCATGGACCATACTTCCTTTATCTCTGAGTGGTCCGATTATATCATATGATGTTAATCAATGGATACTACTTCAACTCAAATGCTATGTATTCTGCTTTTCTTGAGTTTTATAATCTTATGTTTGGATTGGGATTATGTAGAAACTGAACTCTGAAAACCGAACCTGTAATTTTGCCAAATAAGGGTATATGCTGATCAGTGATATGAAAATTTTGGTTACTGCTTACTGTACCGTATTATGACTGGAAATTTTGGCAGCCTTGCAGTATAAGCTGGTTTTGTTGGTTATGTTGCCATAATTTAGTTTTAAGCTCAAAATTTTTAACGGTGCA 1255 0.5131 MPTGMPTANSSAGHDDHSWLWVQIKAEARRDAESEPALASYLYSTILSHSSLERSLSFHLGNKLCSSTLLSTLLYDLFLNSFATDPDLRSAAVADLRAARERDPACVSYSHCLLNYKGFLACQAHRVAHLLWRQSRRPLALALHSRIADVFAVDIHPAARIGKGILFDHATGVVVGETAVIGNNVSILHHVTLGGTGKVGGDRHPKIGDGVLIGAGATILGNIKIGEGAKVGAGSVVLIDVPPRTTAVGNPARLVGGKEKPSKHEDVPGESMDHTSFISEWSDYII 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01878 286 CDD LbH_SAT 151 251 IPR045304 -
Pste6g01878 286 Gene3D Hexapeptide repeat proteins 154 275 - -
Pste6g01878 286 FunFam Serine acetyltransferase 154 279 - -
Pste6g01878 286 MobiDBLite consensus disorder prediction 257 271 - -
Pste6g01878 286 Pfam Hexapeptide repeat of succinyl-transferase 171 187 IPR001451 -
Pste6g01878 286 Gene3D serine acetyltransferase, domain 1 1 153 IPR042122 -
Pste6g01878 286 PANTHER SERINE ACETYLTRANSFERASE 8 286 - -
Pste6g01878 286 ProSitePatterns Hexapeptide-repeat containing-transferases signature. 213 241 IPR018357 GO:0016740
Pste6g01878 286 Pfam Bacterial transferase hexapeptide (six repeats) 204 237 IPR001451 -
Pste6g01878 286 Pfam Serine acetyltransferase, N-terminal 20 124 IPR010493 GO:0005737|GO:0006535|GO:0009001
Pste6g01878 286 SUPERFAMILY Trimeric LpxA-like enzymes 15 256 IPR011004 -
Pste6g01878 286 SMART SATase_N_2_a 20 124 IPR010493 GO:0005737|GO:0006535|GO:0009001
Pste6g01878 286 MobiDBLite consensus disorder prediction 250 273 - -
Pste6g01878 286 FunFam Serine acetyltransferase 5 5 153 - -
Pste6g01878 286 NCBIfam serine O-acetyltransferase 94 253 IPR005881 GO:0005737|GO:0006535|GO:0009001
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01878 Pste-Chr6 8689116 8690865 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01878 20 274 Miscellaneous Gene Families AT2G17640 56.863 1.48e-90 270