Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pste6g01867 | atggcaacccgcgtctttcttatcccagctgcgcggcgccttctcgttaaaaatgtcctcttcatgtcgtcattttctgctcgcacgctcgaagcgagcccgctatcatgttccctggggcgctcccaagaagaagagtgccgatatgtgagggtttgggcctggtgggacttcaaaagctgccacttacccactggtttcgacgcttccaaagttgcccctaccattatggaggctgtgagagccaacggaatcaaaggccctctcaacatcaccgccgttggcgacgttcaactcctctcccgtaggcaccaggaagcactcgcctatactggcgttcgcttctcccatttctccaacgaagtaaagagcagtttcgatattcttgttgacttaatgtattgggtttcgcaaaaccctccacccgcccatgtattttttatatctggtgataaagactttgcgggaatcttgcataagttgagaatgagtaattacaatatcctgcttgctacgccagagagggctcctactgttctcgaaagtgccgcaactatcgcctggcaatggtatcccctgcttaagggggacgatattgctggaaagtgtgtcaaccatcctcctgatgggccctactgttcttggtatggaagctacaaaccgtctccccttgaaaacccggttgtggcgcagcaatctccgtccactgtcgaggtctatcagccttcctccgcttccgttccccagtctcttgtgaaacaggttaggcatatactgagtttgcacccagaagggatagacatcagtgatcttcgtgttcagttgttaaaattaaaatctgatttgcattttgaaaaaagtttctatggacataagaagttttcccgatttctgttgtcgttgccatttgtacaacttcgctccccttctgatggttattttactgtacatttggctcctttggagtctccagaaccttgtaagaaaagtagttctgtggcatcaagaaagaccaacggtaagaatgaggagaaaggatgtccagcaaccccagacgataaaagtaaggttagcgatgcagataagaaattctcaattacctccatccttgaccacaatttaaaaccagggccttcacaagggagacccaatgagaaatatgtggatggtaaatcatcatctcctgcattggttgaaaagcatgtctgtcagtccacgaatgagttgcagccaaaatcttcagtcgtctgcgacaaagttgtggatgtggcttcagatattcaaatgccacccaaggacaacaacgattccaaagtgaagatggattccttaaaactaacttctcaaaatttatttgataatgatgatattgttaggtctgaagatgcaagtcataaaagtatggaaaaactcacaacttctgagaatcactctgctggaattgatcaatcaaagatggaggacaatgttattgcaaactatgaatctggaaattttgattcagagaacaaatatgaagattcaactagaatggaggttgatgaagttttttgcagcccatcttcttcacctgttgatgcctctccagttgtcccaagatctagtgaaagtgaaaaaactaataacagaagttcaacattgttacgctggattagaaattggtggccatttcggaaaagcaatgcaaggtatgatgattataagaacaaggtggtttatcatgttgaggattccaagttatctgaacttgacgagactgttagacaatttgaagagcccaagatacctgggctggatcagaatgttggccatgtggaggatcccaagttatctgaacttgatgagaatgttagtcctgttaaggattccaagttatctgaactggaccagactgctagtctatttgaagagaccaagttatcagaagtagatcagaatgttagtcattctgaaaagcttgagttattttctaatgcttccttttggaatgatatggaatcttttgtttttgcgtccaagggatcactgcttttctccctgtctagaagcagggaggatttggtgcatagaatacaaaatggtggacccgtggttcttaaatcactacccaaaaaagacatccttgtattggtggagttgttaatagcagagaaaaaatggttggaggaaatcccctcccaaacatttccttttaaactaactcgacttgttcagaagaattcattggtggaccaatcccatggtgcaaatggtttgagatctctctttctaggtagtagaacatcacagacaaacttgcaaaaatcatcagaacatgatgtggagaaacacaatcagaatatttctcatactcgagtttcagtgtcaaccactgaaacaaaatttactgagagatctagaaatgatatattagaagactgtcagaaacttgtgagtgagatactcaggggacatccggaagggtataatattggttctttccgaagactatttgttgataggtatggctatcatcttgatatacagaagcttggttatcaaaagttggcagccttgctacagataatgcctggggttaaattagagtccacatatattttcccttctgttcctgctgtctgtgattctgacttggaaacttctatcctgaaaactccagcaaccactgatattcatgcagcctccaactcagatagtgaattatgtgagacggccctgaaagatgataagatggaatccccatgggaggagttaggtcccatttctatcaacaattccaacaataatgatttggaattaaattcaagtcagaaagttatagaactggatacatcaaagccaaagtatcttgattatgaacctgttgtatcagatgatgaattttctgcatctgacggagatgactctcgtttaactcaatcagaagagcaaagaaaacctacatgtaatgaacaagacagttctttttggaaagtaatggatttgtggcacagaagcaaggaagaagaggatagtggcaatatgtcagacaatgttgacagcttgagcgcttctctggtcgatattttagattcatccactaagtcgaccaaggataccctttccaaaattaagtcatcaaattacagagataataatatcgagaagaaatcagacaatgctgacagcttggaagctcccctggctgatgtttttaattcttcttctgagtcaaccaggggtaaaagtccttcatcaaattacagagagaagcaaagatctcggaagaactattccttcgttgctgatccagtcttacctaataaggataagctggttgatgacttaaagaaggcagatgattcaaagatgcaaaactga | 3360 | 0.0 | MATRVFLIPAARRLLVKNVLFMSSFSARTLEASPLSCSLGRSQEEECRYVRVWAWWDFKSCHLPTGFDASKVAPTIMEAVRANGIKGPLNITAVGDVQLLSRRHQEALAYTGVRFSHFSNEVKSSFDILVDLMYWVSQNPPPAHVFFISGDKDFAGILHKLRMSNYNILLATPERAPTVLESAATIAWQWYPLLKGDDIAGKCVNHPPDGPYCSWYGSYKPSPLENPVVAQQSPSTVEVYQPSSASVPQSLVKQVRHILSLHPEGIDISDLRVQLLKLKSDLHFEKSFYGHKKFSRFLLSLPFVQLRSPSDGYFTVHLAPLESPEPCKKSSSVASRKTNGKNEEKGCPATPDDKSKVSDADKKFSITSILDHNLKPGPSQGRPNEKYVDGKSSSPALVEKHVCQSTNELQPKSSVVCDKVVDVASDIQMPPKDNNDSKVKMDSLKLTSQNLFDNDDIVRSEDASHKSMEKLTTSENHSAGIDQSKMEDNVIANYESGNFDSENKYEDSTRMEVDEVFCSPSSSPVDASPVVPRSSESEKTNNRSSTLLRWIRNWWPFRKSNARYDDYKNKVVYHVEDSKLSELDETVRQFEEPKIPGLDQNVGHVEDPKLSELDENVSPVKDSKLSELDQTASLFEETKLSEVDQNVSHSEKLELFSNASFWNDMESFVFASKGSLLFSLSRSREDLVHRIQNGGPVVLKSLPKKDILVLVELLIAEKKWLEEIPSQTFPFKLTRLVQKNSLVDQSHGANGLRSLFLGSRTSQTNLQKSSEHDVEKHNQNISHTRVSVSTTETKFTERSRNDILEDCQKLVSEILRGHPEGYNIGSFRRLFVDRYGYHLDIQKLGYQKLAALLQIMPGVKLESTYIFPSVPAVCDSDLETSILKTPATTDIHAASNSDSELCETALKDDKMESPWEELGPISINNSNNNDLELNSSQKVIELDTSKPKYLDYEPVVSDDEFSASDGDDSRLTQSEEQRKPTCNEQDSSFWKVMDLWHRSKEEEDSGNMSDNVDSLSASLVDILDSSTKSTKDTLSKIKSSNYRDNNIEKKSDNADSLEAPLADVFNSSSESTRGKSPSSNYREKQRSRKNYSFVADPVLPNKDKLVDDLKKADDSKMQN | 1119 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pste6g01867 | 1119 | Pfam | OST-HTH/LOTUS domain | 804 | 862 | IPR025605 | - | |
Pste6g01867 | 1119 | Pfam | OST-HTH/LOTUS domain | 249 | 312 | IPR025605 | - | |
Pste6g01867 | 1119 | ProSiteProfiles | OST-type HTH domain profile. | 247 | 320 | IPR025605 | - | |
Pste6g01867 | 1119 | Gene3D | - | 798 | 865 | IPR041966 | - | |
Pste6g01867 | 1119 | MobiDBLite | consensus disorder prediction | 338 | 368 | - | - | |
Pste6g01867 | 1119 | MobiDBLite | consensus disorder prediction | 323 | 393 | - | - | |
Pste6g01867 | 1119 | MobiDBLite | consensus disorder prediction | 521 | 541 | - | - | |
Pste6g01867 | 1119 | MobiDBLite | consensus disorder prediction | 518 | 541 | - | - | |
Pste6g01867 | 1119 | CDD | LOTUS | 804 | 859 | - | - | |
Pste6g01867 | 1119 | MobiDBLite | consensus disorder prediction | 1045 | 1096 | - | - | |
Pste6g01867 | 1119 | CDD | PIN_limkain_b1_N_like | 51 | 173 | - | - | |
Pste6g01867 | 1119 | ProSiteProfiles | OST-type HTH domain profile. | 803 | 877 | IPR025605 | - | |
Pste6g01867 | 1119 | MobiDBLite | consensus disorder prediction | 951 | 984 | - | - | |
Pste6g01867 | 1119 | MobiDBLite | consensus disorder prediction | 1062 | 1076 | - | - | |
Pste6g01867 | 1119 | Gene3D | - | 244 | 323 | IPR041966 | - | |
Pste6g01867 | 1119 | PANTHER | LIMKAIN B LKAP | 36 | 814 | IPR024768 | GO:0005777|GO:0010468 | |
Pste6g01867 | 1119 | MobiDBLite | consensus disorder prediction | 963 | 982 | - | - | |
Pste6g01867 | 1119 | Pfam | NYN domain | 51 | 184 | IPR021139 | GO:0004540 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pste6g01867 | Pste-Chr6 | 8623873 | 8628499 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pste6g01867 | 46 | 196 | C2H2 Transcription Factor Family | AT5G61190 | 42.581 | 7.00e-33 | 136 |