Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01851 atggaggcagggcgaaaatttgtttcgctgagaagagaattttgcaaatatggtttcaccaaggggtttgatcactataagaatggttctttcggcgtggaagttgatggatctcgcaaccatcacttctctcgttccggagaggatcggtttcatggtggaaaagaggagagagagcaaggtgagatctgtgttgaacatgaggaatacaagggtgcctctggttcgcctccgccagagaagaagagaaagttttccccaatcttatgggacctagctgaaaaggaagcgagagtctcttctaagagaaggagctcgcagattgctgctctgtctcctcctcgtccatctctaccaagcagtcctggagccaatggtgtttattgtggggatgttatgggggattcttttctagattcacgaagctataaacaagatatggaggaagaaagtgatgtgaaaggatggactatcacgaagtcaagatgggcttctgatgatgctctctcacccatgggtgctgatgatgagttcaagcatggtaaagtgagctccagtcctgaaattggggaattccatggcagtggatgttcggagagcacagtcactagatcaggaagcagtggacgagatcattatctgggtccttctactgatgacaccgattctgaaaaggaattccatatggactccatgaccgatgttgaggaacaaagtgacgttggtgattatccatcagattctgatgagaatggtggattgatgcatgtggagagaaatataaacatgcttcagggttgcagaagcgtgtgcgagtttgagatgattaagaaaataaatgaaggaacatatggtgttgtttataaagctagggataagaagactggagaaatagtcgctttgaagaaggtgaagatgaacatagaacgggatggctttccgatgtcatccttgagggaaataaatattctcttgtcttttaatcatccctccattgtgaatgttaaagaagtggttatagatgattttgacggtacttttatggtaatggagtacatggaatatgacctgaagggcatgatggaggttaagaagcagccctttagcatgagtgaaattaaatccttgatgcggcaacttcttgaaggtgtcaggtatctccatgataattgggttatccacagggacttgaagtcatcgaacattctgctgaaccatgatggggagcttaaaatatgtgactttgggttgtcaaggcagtatggaagcccattgaagccatatactcctgttgtggttacactatggtacagagcacctgaacttttgctgggtgccaaagaatactcaacagctattgacatgtggtcagtgggttgcataatggctgaattaattgctaaggagcctctattcaggggtaaaagtgaacttgaacaacttgataagatttttcgaacactgggtacacctgatgagaagatttggccaggattatccaaattacctggggctaaagcaaattttgttaagcaaccatttaatacactaaggaaaaagtttccagctgcatcatttactggtttgccggttttatctgagctgggattcgacttgttgaagcagctcctaacttatgaccctgaaaagaggataactgcagaagatgctctccttcatgattggttccatgaagcccctcttcccaaatctgatttcaagccaatttttccttcttggcagtgctag 1749 0.0 MEAGRKFVSLRREFCKYGFTKGFDHYKNGSFGVEVDGSRNHHFSRSGEDRFHGGKEEREQGEICVEHEEYKGASGSPPPEKKRKFSPILWDLAEKEARVSSKRRSSQIAALSPPRPSLPSSPGANGVYCGDVMGDSFLDSRSYKQDMEEESDVKGWTITKSRWASDDALSPMGADDEFKHGKVSSSPEIGEFHGSGCSESTVTRSGSSGRDHYLGPSTDDTDSEKEFHMDSMTDVEEQSDVGDYPSDSDENGGLMHVERNINMLQGCRSVCEFEMIKKINEGTYGVVYKARDKKTGEIVALKKVKMNIERDGFPMSSLREINILLSFNHPSIVNVKEVVIDDFDGTFMVMEYMEYDLKGMMEVKKQPFSMSEIKSLMRQLLEGVRYLHDNWVIHRDLKSSNILLNHDGELKICDFGLSRQYGSPLKPYTPVVVTLWYRAPELLLGAKEYSTAIDMWSVGCIMAELIAKEPLFRGKSELEQLDKIFRTLGTPDEKIWPGLSKLPGAKANFVKQPFNTLRKKFPAASFTGLPVLSELGFDLLKQLLTYDPEKRITAEDALLHDWFHEAPLPKSDFKPIFPSWQC 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01851 582 SUPERFAMILY Protein kinase-like (PK-like) 266 568 IPR011009 -
Pste6g01851 582 MobiDBLite consensus disorder prediction 65 102 - -
Pste6g01851 582 ProSitePatterns Serine/Threonine protein kinases active-site signature. 392 404 IPR008271 GO:0004672|GO:0006468
Pste6g01851 582 CDD STKc_CDC2L1 267 563 IPR045267 GO:0004674|GO:0005524|GO:0006468
Pste6g01851 582 FunFam Cyclin-dependent kinase G-2 355 582 - -
Pste6g01851 582 Gene3D Phosphorylase Kinase; domain 1 260 354 - -
Pste6g01851 582 FunFam cyclin-dependent kinase G-2 isoform X1 258 354 - -
Pste6g01851 582 PANTHER CELL DIVISION PROTEIN KINASE 272 569 - -
Pste6g01851 582 MobiDBLite consensus disorder prediction 177 225 - -
Pste6g01851 582 MobiDBLite consensus disorder prediction 196 214 - -
Pste6g01851 582 Pfam Protein kinase domain 273 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01851 582 ProSiteProfiles Protein kinase domain profile. 273 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01851 582 Gene3D Transferase(Phosphotransferase) domain 1 355 573 - -
Pste6g01851 582 SMART serkin_6 273 563 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste6g01851 582 MobiDBLite consensus disorder prediction 65 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01851 Pste-Chr6 8507643 8511107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01851 266 569 Core Cell Cycle Gene Families AT5G10270 45.312 3.19e-87 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Pste6g01851 Pkinase 1e-74 CL0016