Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01807 CAAAGTAGCAATAGCAAAGGAATACACACACACGCCTTTTCTGCAACTCACTGTAGCAAAGGTTCAGTTTCTGCTTTGATTACATTTAAACCATCTCAGATATGGGATACTTATCACAACCATCAGCACACTCAAACATGAAATCAATCTCGATTGCAAAGCTGGATGAGAATGGAGAGTTATGTTCTTATGATTCCTGGCTAGGAAAGCATCCTTCTGCCTTGGACAATTTTGAGGAAGTGATGAGCATTGCTGAAGGGAAAGAGATTGTTGTGTTTTTGGACTATGATGGAACACTCTCGCCGATTGTAGACGACCCTGATAACGCTTACATGAGTGATGCAATGCGTGCAGCTGTTCGTGAAGTTGCTTATTGTTTTCCCACTGCCATTGTTAGTGGAAGATGCAAGGATAAGGTATACGAATTTGTGAAGCTAAAGAATATTTATTATGCTGGAAGTCATGGTATGGATATATCAACTCCATTAGGCTCTTCAAAATATGAAGATCAGAAGCATCAGATAAAAGCTGTTGATGAAAAGGGTAATCATATTGTTCACTTTCACCCGGCAAAAGAATTTTTGCCAACAATCCAAGAGATAATTAAGGTTTTGAAAGAAAAGACAAGAAGAATAAAGGGATCTATGGTTGAGGATAATAAGTTCTGTGTAACTGTACACTACCGCTGTGTGAAAAATGAAGAGGATGTTGGTGTTCTCAAAGAAATAGTGGAGTCTAGTATGAAAGATTACCCCAGTTTTCAAATATCAAGAGGAAGAAAGATTATGGAGATACGTCCAAAGATAAACTGGGACAAAGGCCGTGCTCTTTTGTATTTGCTTGGAACTCTAGGCTTCGACAACTATAACAATGTTCTTCCAATTTACCTTGGAGATGATAGAACAGATGAAGATGCTTTTAAGATTATAAGACACATTGGTCGTGGTTTTCCCATTGTTGTTTCTTCAATTGCAAAGGAGACGGAGGCTTCATACTCCCTGCGTGACCCTTCTGATGTGCTGGCTTTCTTGATTTGTTTAGCAAAATGGAAGAAGGACATGTCACAGAAAACTAAA 1076 0.3875 MGYLSQPSAHSNMKSISIAKLDENGELCSYDSWLGKHPSALDNFEEVMSIAEGKEIVVFLDYDGTLSPIVDDPDNAYMSDAMRAAVREVAYCFPTAIVSGRCKDKVYEFVKLKNIYYAGSHGMDISTPLGSSKYEDQKHQIKAVDEKGNHIVHFHPAKEFLPTIQEIIKVLKEKTRRIKGSMVEDNKFCVTVHYRCVKNEEDVGVLKEIVESSMKDYPSFQISRGRKIMEIRPKINWDKGRALLYLLGTLGFDNYNNVLPIYLGDDRTDEDAFKIIRHIGRGFPIVVSSIAKETEASYSLRDPSDVLAFLICLAKWKKDMSQKTK 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01807 325 Pfam Trehalose-phosphatase 59 304 IPR003337 GO:0003824|GO:0005992
Pste6g01807 325 CDD HAD_TPP 57 308 - -
Pste6g01807 325 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 15 323 IPR044651 GO:0004805|GO:0005992
Pste6g01807 325 NCBIfam trehalose-phosphatase 54 314 IPR003337 GO:0003824|GO:0005992
Pste6g01807 325 NCBIfam HAD-IIB family hydrolase 58 280 IPR006379 -
Pste6g01807 325 Gene3D - 58 300 IPR023214 -
Pste6g01807 325 FunFam - 56 108 - -
Pste6g01807 325 SUPERFAMILY HAD-like 57 316 IPR036412 -
Pste6g01807 325 Gene3D - 138 234 - -
Pste6g01807 325 FunFam Trehalose 6-phosphate phosphatase 157 234 - -
Pste6g01807 325 FunFam Trehalose 6-phosphate phosphatase 163 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01807 Pste-Chr6 8264896 8273498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01807 58 310 Trehalose Biosynthesis Gene Families AT1G60140 25.769 2.51e-07 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01807 6 8264896 8273498 Pste6g01807 6 8264896 8273498 ECH