Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01802 atggccaccaccaccaccagtcttggcggaggggccggcggagacgaccgggtcctggcgacggcacagcagatcgtgaagagcctcagagccgcaaaagaggatcgcgaggacatgcttctgatcttctccactttcgataaccgtctttccggcatctccgacctcatcaacggcgacgattccaaatcatcggacgaagaagaactcgaccgcttcgaagccgctgagaaggtgattctcgccgacgcgtccctcaccggtgagccttcgcgccagtccacatcactcttcaatcctcctaacaattccgccgagtacttctccgccgttgacgagatcatccactggatggagcagttctcgatcgcgccgccatcctccgccgccggacgcactggccaggtcatcgtggaccgcgccgagaacgcgattcagctcgcgatgtcgcggctggaggacgagctgcggcacgtgttgatatgcaacacgatccctctggacgccgtgagccgctacggctcgatcaggagggtttcgctctcgttcggctcgcacgacggcgcaatcgacgattccactcttgagagcttcagcgaggtcgggtcgagccgctaccacgagcgcggcgtgagcctcggcgacgatttgttcgtcgatttggtgcgtcccgaggcggttcaggacctcagagaaatcatcgatcgcatggttaggtctggttacgagagagagtgtcttcaggtttatagcagtgtccgtcgcgacgcgttggatgagtgtttggttattctcggtgttgagaggttgagtattgaagaggttcagaaggttgagtggaggagtttggatgagaagatgaagaattgggttcaagctgttaagcttgttgttggggttttgttgagtggtgagaagaggctgtgtgatggcctttttgtggatttggatgatttgaaggagatttgtttcaatgagactgcgaaggggtgtgtgatgcagttgctgaatttcggtgaggctatcgccatttgtaagcggtcaccggagaagttgttccggattttggatatgtacgaggctttgagggatgcttttcctgattttcaggccatggtttcggatgagtttgtgattggtgaggcccatggagtgctgagagggcttggtgaggctgccaaagggacttttgctgagtttgagaactgtattaggaacgagacttccaagaagccagtcataacaggtgatgttcatcctttacctcgttatgtaatgaattacctcaagttgcttgttgattatggtgactctatggattcacttctggagattagtgaggaggatctttatcgatttagaaatgatcttggtggtgatggtttacagttagaggccatgtcaccattggggcgccggattctgttactcatgtctgaactcgagtataatcttgaggagaagtcgaagctttatgaagatagtgcaatgcagcaggtgtttttgatgaacaatctgtattacctcgtgcggaaagtgaaggactcggatcttggaaaggtcttgggggataattggattaggaaacgccgtggacaggtgcgccagtatgctacagggtatctcagagcttcttggagcaaggccttatcttgtttgaaggatgaagggattggagggagctctagtaatgcatcgaaaatggctttaaaggagcggttcaagaatttcaatgcatgttttgaagaaatttacagggttcagacagcctggaaggtaccagatgatcagcttcgggaggagcttaggatatcaatatcagagaaggtgattcctgcataccggtcgtttgtgggaaggtttaggagtcagttagaaggaaggcatgtggggaagtacattaagtatacaccagaggatctagagacctatctattagatttatttgaaggatccccagctgtattgcatcacataaggagaaaaagtacataa 1995 0.0 MATTTTSLGGGAGGDDRVLATAQQIVKSLRAAKEDREDMLLIFSTFDNRLSGISDLINGDDSKSSDEEELDRFEAAEKVILADASLTGEPSRQSTSLFNPPNNSAEYFSAVDEIIHWMEQFSIAPPSSAAGRTGQVIVDRAENAIQLAMSRLEDELRHVLICNTIPLDAVSRYGSIRRVSLSFGSHDGAIDDSTLESFSEVGSSRYHERGVSLGDDLFVDLVRPEAVQDLREIIDRMVRSGYERECLQVYSSVRRDALDECLVILGVERLSIEEVQKVEWRSLDEKMKNWVQAVKLVVGVLLSGEKRLCDGLFVDLDDLKEICFNETAKGCVMQLLNFGEAIAICKRSPEKLFRILDMYEALRDAFPDFQAMVSDEFVIGEAHGVLRGLGEAAKGTFAEFENCIRNETSKKPVITGDVHPLPRYVMNYLKLLVDYGDSMDSLLEISEEDLYRFRNDLGGDGLQLEAMSPLGRRILLLMSELEYNLEEKSKLYEDSAMQQVFLMNNLYYLVRKVKDSDLGKVLGDNWIRKRRGQVRQYATGYLRASWSKALSCLKDEGIGGSSSNASKMALKERFKNFNACFEEIYRVQTAWKVPDDQLREELRISISEKVIPAYRSFVGRFRSQLEGRHVGKYIKYTPEDLETYLLDLFEGSPAVLHHIRRKST 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01802 664 Pfam Exo70 exocyst complex subunit 288 646 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pste6g01802 664 Coils Coil 138 158 - -
Pste6g01802 664 PANTHER EXOCYST COMPLEX PROTEIN EXO70 67 651 IPR004140 GO:0000145|GO:0006887
Pste6g01802 664 SUPERFAMILY Cullin repeat-like 101 650 IPR016159 -
Pste6g01802 664 Gene3D Exocyst complex component Exo70 91 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01802 Pste-Chr6 8237075 8239535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01802 16 663 EXO70 exocyst subunit family AT5G50380 59.499 0.0 763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01802 6 8237075 8239535 Pste6g01802 6 8237075 8239535 ECH
Pste2g00253 2 1613549 1618013 Pste6g01802 6 8237075 8239535 PCT