Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01798 GCGTGACCATTAAAATTGTTTCTCTGAAGGCTTATTAGTGTAACATTTTTTGCTTTCTTTAGTTTCAATTCCTCTGCTTCATGCTTTGTTCCTGGTTAAGTTAGTAAAGGAAACAGAAAAGAGAGATTTTACACTTATCAAGCAACCTTGACATAGCTAATAAGGTTTGAGTCTTTGATTGTCTAAGTTTCCTATAAAACGTAAACATTCTCACTGCAATTGGAAGTAGATTAATCATGACTGCAGAGGGAAAGAAATTTGTGAGGTTTAAGGATTGGAAGTCACTTTCATCTTCAAGTATTGAGCACAATGATTCTTCTAATGATGGATTCCTCAAAAGAAAATTTCAATCAAGCGTAAGTTCTGCCAGTGATGGATCGGTAACAAATTTGTCTTGTAGGAGCCATGTTCTTGATCCACAGGGTCCAACACTTCAGAAGTGGAACAAAATTTTTGTAATCACAAGTGTGATGGCAATCTCTGTGGACCCACTTTTCTTTTACATCCCAGTAATTGATGACAAGAAACAATGCCTTGCTTTGAATGGAACACTGAAGATTACTGCCAGTGTTCTCCGCACATTCTTTGATCTTTTCTACATTCTTCACATCATCTTTCAGTTTCGAACCGGGTTTATTGCACCTTCCTCTCGTGTATTTGGAAGGGGTGAGCTAGTTAATGATCCTTGGGCCATAGTGACGAGATACTTGAGTTCTTACTTCATCATTGACATTCTATCAATTATTCCACTGCCTCAGATGGTCATTTTAGCTATGATCCCATTCCCAAAATGCTCAGTTCCTAACGTGGGAAAGGATTTGTTGAAGTATACCATAATAGCCCAGTACGTGCCTAGAATTCTGCGAATCTACCCGTTATTCAAAGTAGTAACAAGCACTTCTGGCATTTTGACTGAGACAGCATGGGCTGGAGCAGCTTACAATCTTTTTCTTTATATGCTAGCAAGTCATGTGGTTGGAGCTTTCTGGTATCTGTTTTCAGTAGAATCAAGGGTGCGGTGCTGGCGAAGGTGGTTGAAGTTGAACAATAATACGAAAAACTTTCATGAATCCTACCTTAGCTGTGCTGCACGTGGCGATTCTCATTTTCAATCACTTCTTAGTTCTTCTTGTCCTTTAACTGATCCACAAGACATCACAGACCTGGAAACTTTCAATTTTGGAATATTTATAGAAGCTCTAAAAGCTCGCGTGGTAGAATCAAATACAGGTTTTCGTCAGAAGTTCTTCTACTGCTTTTGGTGGGGTTTGCGCAGTGTAAGTTCTGTTGGTCAAGGTCTCGAGACAAGTACTTACGTTGGGGAGATAATCTTTGCTATCTTCATTGCTGTCTTTGGATTGATTCTGTTTGCATCACTTATTGGAAATATGCAGAAATATCTACAATCTACCACTGTCAGAGTTGAAGAGATGAGAATCAAAAGGAGAGATGCAGAGCTGTGGATGTCCCACCGTATGCTACCTGATATCCTGAAGCAAAGAATTAGACGGTATGAACAATACAAATGGCAAGAAAATAGGGGTGTTGAGGAGGAGACATTAATTCGCAACCTCCCTAAAGATCTCAGAAGGGACATAAAACGTCATCTTTGCTTAGAACTACTTAAAAAAGTGCCAATGTTTGAGAGCATGGATAATCAGTTGTTGGATGCACTATGTGATAAACTGAAGCCAGTCCTATACACAGAGAAGAGTTACATAGTTCGTGAAGGGGATCCAGTAGATGAAATGCTCTTCATAATGCGCGGAAAACTTGCTACTGCCACAACAAATGGTGGAAGAACTGGTTTCTTCAACTCCTTTGAGATCAAGGCTGGTGATTTCTGTGGAGAAGAGCTCCTAACATGGGCCTTGGTTCCCAATTCCTCGTCAAATCTACCCATTTCAACTCGAACAGTAGAAACTATATCAGAAGTCGAAGCCTTTGCTCTCATGCACGATGACTTGAAGTGTGTTGCCTCCCAATTTAGACGTCTTATAAACAGCAAACAGCTCCAACACACTTTCAGGCAAGGGTTCTACTCCTTGCATTGGAGGACATGGGGTGCATGTTTCATACAAGCAGCTTGGCGCAGATACAAGAAAAAGAAGGCAGAGAGGATGTTACGTGAAGCAGAAGAAAGGATACAAGCATTGGAAAATGAGGAAGGGTCATCACCTAGCTTTGCTGCCACCGTATATGCATCAAGGTTTGCATCGAGTGCATTGCACCACTTGCGAAGTGGTAAACGCAGCAGAGTGCCACAGCCACAAAGACTGTTACCCCTGATGCCTCAGAAACCCGCTGAGCCAGATTTCAATGCTGACACAAACTAGGGGGTGTTCTCATATCGCAACTTTAATTTTTTATAAGACTGAACCTGAGAATTGTGCATATTTAACATGTCCTTAGCAATTGTGCGTGCATGAGTAAGAGGTGTTGACAATTTCCTACTCCTACAACAACAAACTGTGCATATGTAGGCACAGCAGTGTGTAAAAAATATTAGTAATTGTGTTTGGAT 2524 0.4077 MTAEGKKFVRFKDWKSLSSSSIEHNDSSNDGFLKRKFQSSVSSASDGSVTNLSCRSHVLDPQGPTLQKWNKIFVITSVMAISVDPLFFYIPVIDDKKQCLALNGTLKITASVLRTFFDLFYILHIIFQFRTGFIAPSSRVFGRGELVNDPWAIVTRYLSSYFIIDILSIIPLPQMVILAMIPFPKCSVPNVGKDLLKYTIIAQYVPRILRIYPLFKVVTSTSGILTETAWAGAAYNLFLYMLASHVVGAFWYLFSVESRVRCWRRWLKLNNNTKNFHESYLSCAARGDSHFQSLLSSSCPLTDPQDITDLETFNFGIFIEALKARVVESNTGFRQKFFYCFWWGLRSVSSVGQGLETSTYVGEIIFAIFIAVFGLILFASLIGNMQKYLQSTTVRVEEMRIKRRDAELWMSHRMLPDILKQRIRRYEQYKWQENRGVEEETLIRNLPKDLRRDIKRHLCLELLKKVPMFESMDNQLLDALCDKLKPVLYTEKSYIVREGDPVDEMLFIMRGKLATATTNGGRTGFFNSFEIKAGDFCGEELLTWALVPNSSSNLPISTRTVETISEVEAFALMHDDLKCVASQFRRLINSKQLQHTFRQGFYSLHWRTWGACFIQAAWRRYKKKKAERMLREAEERIQALENEEGSSPSFAATVYASRFASSALHHLRSGKRSRVPQPQRLLPLMPQKPAEPDFNADTN 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01798 699 Pfam Cyclic nucleotide-binding domain 488 578 IPR000595 -
Pste6g01798 699 MobiDBLite consensus disorder prediction 667 699 - -
Pste6g01798 699 SUPERFAMILY Voltage-gated potassium channels 60 390 - -
Pste6g01798 699 Gene3D Helix hairpin bin 395 459 - -
Pste6g01798 699 Gene3D - 72 392 - -
Pste6g01798 699 FunFam Cyclic nucleotide-gated ion channel 1 466 584 - -
Pste6g01798 699 ProSiteProfiles cAMP/cGMP binding motif profile. 468 552 IPR000595 -
Pste6g01798 699 Gene3D Jelly Rolls 466 586 IPR014710 -
Pste6g01798 699 Pfam Ion transport protein 69 396 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pste6g01798 699 CDD CAP_ED 468 588 IPR000595 -
Pste6g01798 699 Coils Coil 623 643 - -
Pste6g01798 699 FunFam Cyclic nucleotide-gated ion channel 1 395 459 - -
Pste6g01798 699 SUPERFAMILY cAMP-binding domain-like 397 584 IPR018490 -
Pste6g01798 699 SMART cnmp_10 468 599 IPR000595 -
Pste6g01798 699 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 40 694 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01798 Pste-Chr6 8183746 8189200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01798 1 697 Ion Channels AT5G53130 61.538 0.0 860
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g03448 5 27940744 27944782 Pste6g01798 6 8183746 8189200 PCT