Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01795 ATGGCTGACATGACACAAACTCTGGCGTTCTATGTGCGCAACATTAACTATCTTACTCAAAAGATACAAGTCTATGACCCTGAAGATTGCCTCTCCCAACGTCTTTTGGCCCTCAATGTCTCAGATTCTCCTTTTATTCCCACTTTTACTCGTAACTACACCTTCCTAAGCTGCCCATTTCAGAATGCAGGATCAGATTTCGTTACCGTAGAATGCCTCAGTAATTCCACAAATTTTGTATCAGCCATCCCTTCAGTGAACTTGCCCAATCCATTGCCTTATTCTTGCTATGTGGGCTTTCAGTCCCAGTTGCAAGGCCGAACAGCAGTAGGTAAGGACGTGGAGGGGAAGATTTTAGAAAGATCACATTGTGCATTGGTGGAGTTGTGATGGCATGCTGTGTGTGCTATAAGGACAGACTAGGCAACCTTGGTGGCAATGCATCGATATCAGCAGAACCGGAAATAGTGAGGGGGGTGGTCTGGACGAGTCAACAGGATTGATAGAGTCATATGAAAAGTTGGTGGTTGGAGAGAGTAGGTGGACGAATTCCTGGACCGAACAATGGATGCTGTTGGATATGCTCATCGGAGTATAATAGCAAAGAGATAATAAGATTGATTCCTGAATGCAAACACTGCGCATGCATCAATACCACATTCCCGGTTTGCTTCATGGCACCTCCGTTAACCCCTAATCCAAAACCAAAGTATTACAATCCCACTGCATAACGGATTGATTTATAATACGGTACATGGTGAGGAG 765 0.4458 MADMTQTLAFYVRNINYLTQKIQVYDPEDCLSQRLLALNVSDSPFIPTFTRNYTFLSCPFQNAGSDFVTVECLSNSTNFVSAIPSVNLPNPLPYSCYVGFQSQLQGRTAVGKDVEGKILERSHCALVEL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01795 129 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 9 98 IPR046948 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01795 Pste-Chr6 8171589 8173905 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01795 10 98 C3H Transcription Factor Family AT2G46495 44.444 1.42e-18 77.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01795 6 8171589 8173905 Pste6g01795 6 8171589 8173905 ECH
Pste5g03453 5 27969337 27972699 Pste6g01795 6 8171589 8173905 PCT