Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01789 CGGGGTGTTCCCCTCTGTCATATACCCACACACAAGCTTCTTCTGCTTCTTTCTTGTTTTCTTTCTGCTAATTCAAATTGTTTCTTTCTCGGGAAAATCTTCACGCTGCGTTTTCCCGGGATTTCCCGTTCTGCGTTCCCGCAAATCCTTCCGCCGATCGAAACCAACGTTTCAATCTCCGTTCAATTCCGTTTTCTCGTCACGTCTCAAAAAGAAAAAAAACCATTCAAACCTTCGTCCTTTCATTCTCTTGTGGCTTCATTGTTCGATTCAGGGTTTCCCAAAGGAAAAAAAAATCACTCATTCGCGGTTCGCAGAGCTTTGCAATATTCAATACTCGTGGCAATAACATGATATATTGCGAATTTGCCCAAGACTCGTGAGGTTTGGGTTTGAATTACGCGATTCTTGAGGACGTCTTGTCGATTCGGATGAAATTAGGGTTTCGTGGTGCGGAATCGTCGACGTGGATGGTTGCAACATCATGATAGTTAAGCGGACAATGAGAACCGAAACGCCGAACTTGAAACGATGTAAGATTGATGATGCCGAGAATGCTATTCAGAAGAAGCGTAGGGTGAACGGGTTTTACTCTCTGGGAGTGCCAGGGGATGCTGAATATTTCAGCAGCGGTTCTGGTTCTTGGAGCAGCGAAGGGTCGTATTGGGGTGGTGGTTGTGGCGTTGGCGAGGTTCAGTCCAATTCGAAATCCGTGCCATTTAATCGAAAAATGATGAAGGAGACGCGTCGACCTCCGTTGCTGCGGTCCTCGCGTGGCCGTGTCCAGAAGCTTCCGTCGAGGTTCAATGACTCAGTTCTTGACACAGACGGAGATTCGAGCTTTGAAGATAATAATGATACTAGTCTTGTGGAGGATGGAAGGGGTGGCATTGGTGTGAGAGTGGAGAGGAGTGATAGTGTGTGTTATTCGTCTAGTGTTGGGAGAAGGACTGTTAAGGCTGAGAGTAATACGTCTGGGATTAGTTTTGAGGGTGTGGACCAAATGCCCAATGGTGAGAAGAGGAAAGAGGTTTACAAGCCGGAGGATTTTGCTTTGGGGGATATCGTTTGGGCTAAGTGTGGCAAGAGGTACCCGGCATGGCCTGCTGTGGTGATTGATCCTGTCTTGGAGGCTCCGGAGTCTGTCCTTAGCTGTTGCATTCCCGGTTCAATTTGTGTCATGTTTTTTGGTTATTCAAAGAATGGAACTCAAAGGGACTATGCGTGGGTGAAGCAGGGAATGGTGTACCCCTTCTCGGAGTTCATGGACAGGTTTCAAGGGCAGACTCGGTTGTACAAGAGCAAACCCAGTGACTTCCGCATGGCTCTCGAGGAGGCAATGCTGGCAGAAGATGGTGTTCTGGAATCACATTTGGTAAGAGAGGAAGTAACTGAAGTAGAAGTTCATCATGATGGACTCATGGAGGCCACCGGTTCTTATGTTGGTGAGGAATACTACGGCCAGGATCAGGATACAAGGTATTGCACTGGCTGTGGTCTGATGTTGCCATGCAAAGCTATGAAGAAGATTCATGGTTCAAATTGTGCACCTCAATTTTATTGCAAACATTGTGCTAAGTTACAAAAATCAAAACAATATTGTGGCATTTGCAAAAGGATTTGGTATCATTCAGACGGTGGGAATTGGGAAATGAAAAAATCAGCTTACTATTGTCCAGATTGCAAGGAAAAATTGAATTGTAAACTACCACCATCACAAACATATAAGTCAAACATCAAATTAATAGAGAATAGCCGAAAATCTATGATACCTGAGCATGTGTTGGTGATGTGCAATGGCATGGAGGGAATTTACATCCCAAAGCTTCATCTAGTCATGTGCAAGTGTGGCTCTTGTGGTTCAAGGAAGCAAACACTTAGTGAATGGGAAAAACATACAGGTTGCAGAGCGAAAAAATGGAAACATAGTGTGAAAGTGAAAAGCACAATGTTACCGCTGGAAAAATGGATTGCAGAACACATTCCACTAGATGGAATACCACAGCAGTTAGATCAACAGCAGGTACTGGCCTTTTTGCAAGAGAAGTATGAGCCTGTTAATGCAAAATGGACAACAGAAAGATGTGCTGTTTGCAGATGGGTTGAAGATTGGGAAGATAACAAAATTATTATTTGTAACAGATGCCAAATAGCAGTCCACCAAGAATGCTATGGGGCAAAGAATGTTCAGGATTTTACTTCTTGGGTTTGTAGAGTATGCGAAACTCCTGATGTTGAGAGAGAGTGTTGCCTCTGCCCACCAACTGATGTTGAAATGTTGTGGGTTCATGTAACATGTGCTTGGTTTCGACCTCAAGTTGTTTTCCAAAACCATGAGGCCATGGAACCTGCCATGGGAATTCTTAAAATTCCTTCTAATTCCTTTGTGAAGACTTGTGTGATCTGTAAACAAAGCCATGGTTCCTGTATAACTTGTTGCAAGTGTGCTACTTACTTTCATGTGATGTGTGCATCAAGGGCAGGATATACAATGGAATTGCATTCCATGGAGAAGAATGGGACTCTAATAACAAAGAAGCTAATATATTGTACAACTCACAGGGTCCCAAATCCAGATTCAGTACTTGTCGTACACACACCCCTTGGGATTTTCTCTCCCAGAACTTCACTTGAAAATCAGAAGGAATGCTTGAGGGGATCAAGGCTAATCTCATCAAAGAATATAGAGCTTAATGAATCTTCAACCACTGAAAATGACATAGTTGAACCACTGTCTGCTGCAAGATGTCGTGTGTACCGAAGATCTCTTAATAAGAGAGCTGATGTGCCAATAATTCACTTGCTGAGGGGACCCAGCTTTCATTCTTTAGGTGCAATAACTCAATTGAACCACTTAAAGGATGGTGTCGAATCTAAAGTATTCACTTCTTTCAAGGAACGTCTTGACCATTTACGGAAAATGGAAAAATTTAGAGTTTGCTTTGGAAAATCAGGTATTCATGGATGGGGTCTCTTTGCTCGTAGGGATATACAAGAAGGAGAGATGGTTGTTGAGTACCGTGGTGTGCATGTAAGACGTAGTGTTGCTGATTTGAGAGAAGCTAAATACCGTTCAGAAGGCAAAGATTGCTATCTATTCAAGATCAGTGAGGAAGTGGTGGTTGATGCAACGAACAGAGGCAATATAGCACGTTTAATAAACCATTCTTGCATGCCAAACTGCTACGCGAGGATTATGAGTCTGGGTGATCAGGGCAGCCGAATTGTTCTTATTGCCAAGACAAATGTTTCTGCTGGTGAAGAATTAACGTATGATTACTTGTTCGATCCAGATGAGCGGGATGAACTGAAAGTTCCCTGCCTTTGCAAAGCCCCTAACTGTAGGAGATTTATGAATTAGGTTTAGCATTTGTTTTGCTCTGAGCAATTGTAGTTACCAAACCACAGTAAACATTGTCCATTGAGCCATTTTTTTAATTTTTCACTAGTTCAGTATAATTTGTATATCATTATATTATTATAAAATAAAATAGAAAACTTTTGAGCAAATGAGCTGGAGTCATTTTTGTAACTTGGAAGGATATTATTCAAAATTTTTGACATTTATAGGCAAATTACTTGAAGACAAAAGCTGTATAGTGGAGCACATATATGTTACGTAATACTATCAGGCATTTTATGTAAACTCTTGGGCATATATGCTGTATTTGAATCTATTTTCGGG 3685 0.422 MIVKRTMRTETPNLKRCKIDDAENAIQKKRRVNGFYSLGVPGDAEYFSSGSGSWSSEGSYWGGGCGVGEVQSNSKSVPFNRKMMKETRRPPLLRSSRGRVQKLPSRFNDSVLDTDGDSSFEDNNDTSLVEDGRGGIGVRVERSDSVCYSSSVGRRTVKAESNTSGISFEGVDQMPNGEKRKEVYKPEDFALGDIVWAKCGKRYPAWPAVVIDPVLEAPESVLSCCIPGSICVMFFGYSKNGTQRDYAWVKQGMVYPFSEFMDRFQGQTRLYKSKPSDFRMALEEAMLAEDGVLESHLVREEVTEVEVHHDGLMEATGSYVGEEYYGQDQDTRYCTGCGLMLPCKAMKKIHGSNCAPQFYCKHCAKLQKSKQYCGICKRIWYHSDGGNWEMKKSAYYCPDCKEKLNCKLPPSQTYKSNIKLIENSRKSMIPEHVLVMCNGMEGIYIPKLHLVMCKCGSCGSRKQTLSEWEKHTGCRAKKWKHSVKVKSTMLPLEKWIAEHIPLDGIPQQLDQQQVLAFLQEKYEPVNAKWTTERCAVCRWVEDWEDNKIIICNRCQIAVHQECYGAKNVQDFTSWVCRVCETPDVERECCLCPPTDVEMLWVHVTCAWFRPQVVFQNHEAMEPAMGILKIPSNSFVKTCVICKQSHGSCITCCKCATYFHVMCASRAGYTMELHSMEKNGTLITKKLIYCTTHRVPNPDSVLVVHTPLGIFSPRTSLENQKECLRGSRLISSKNIELNESSTTENDIVEPLSAARCRVYRRSLNKRADVPIIHLLRGPSFHSLGAITQLNHLKDGVESKVFTSFKERLDHLRKMEKFRVCFGKSGIHGWGLFARRDIQEGEMVVEYRGVHVRRSVADLREAKYRSEGKDCYLFKISEEVVVDATNRGNIARLINHSCMPNCYARIMSLGDQGSRIVLIAKTNVSAGEELTYDYLFDPDERDELKVPCLCKAPNCRRFMN 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01789 958 FunFam Histone-lysine N-methyltransferase 790 958 - -
Pste6g01789 958 MobiDBLite consensus disorder prediction 107 132 - -
Pste6g01789 958 Pfam PHD-zinc-finger like domain 587 692 - -
Pste6g01789 958 PANTHER PHD FINGER PROTEINS 12 935 - -
Pste6g01789 958 SUPERFAMILY Tudor/PWWP/MBT 182 318 - -
Pste6g01789 958 FunFam Histone-lysine N-methyltransferase 583 695 - -
Pste6g01789 958 ProSiteProfiles PWWP domain profile. 191 260 IPR000313 -
Pste6g01789 958 ProSitePatterns Zinc finger PHD-type signature. 534 579 IPR019786 -
Pste6g01789 958 Gene3D - 426 512 IPR010919 -
Pste6g01789 958 Pfam PWWP domain 192 288 IPR000313 -
Pste6g01789 958 ProSiteProfiles Extended PHD (ePHD) domain profile. 573 693 IPR034732 -
Pste6g01789 958 ProSiteProfiles SET domain profile. 816 933 IPR001214 GO:0005515
Pste6g01789 958 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 574 694 IPR013083 -
Pste6g01789 958 Gene3D SET domain 799 958 IPR046341 -
Pste6g01789 958 Gene3D - 178 295 - -
Pste6g01789 958 Pfam SET domain 827 932 IPR001214 GO:0005515
Pste6g01789 958 CDD SET_SETD1-like 805 954 - -
Pste6g01789 958 CDD PHD_ATX3_4_5_like 533 579 IPR042011 -
Pste6g01789 958 SMART PWWP_4 189 258 IPR000313 -
Pste6g01789 958 Pfam PHD-finger 546 580 - -
Pste6g01789 958 ProSiteProfiles Post-SET domain profile. 942 958 IPR003616 -
Pste6g01789 958 SMART PHD_3 359 401 IPR001965 -
Pste6g01789 958 SMART PHD_3 533 580 IPR001965 -
Pste6g01789 958 SMART PHD_3 637 693 IPR001965 -
Pste6g01789 958 SUPERFAMILY FYVE/PHD zinc finger 532 591 IPR011011 -
Pste6g01789 958 SUPERFAMILY SET domain 812 954 IPR046341 -
Pste6g01789 958 CDD PWWP_AtATX3-like 192 291 - -
Pste6g01789 958 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 528 573 IPR013083 -
Pste6g01789 958 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 958 IPR025780 -
Pste6g01789 958 SMART PostSET_3 942 958 IPR003616 -
Pste6g01789 958 ProSiteProfiles Zinc finger PHD-type profile. 531 582 IPR019787 -
Pste6g01789 958 SMART set_7 816 939 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01789 Pste-Chr6 8145822 8156961 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01789 534 692 C2H2 Transcription Factor Family AT3G14740 30.636 6.68e-16 78.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pste6g01789 SET 9.9e-19 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01789 6 8145822 8156961 Pste6g01789 6 8145822 8156961 ECH