Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01786 atgaagggtataaagatagatccttcaatgctcagtgcacgtgactatgaaggtcatggttcacatactttatcaacagctggaggtaactttgttcgtggagctaatgtatctgggtttggcgaaggaacagcaagtggtggatcaccaaaagctcgagttgcaacctacaaggtgtgttggccaacttgtaatgatgcagacattttggctgctatagagcatgccattagtgacggagttgatgtgctttccttgtctctgggctcaaaaaatcccccagaatattctcaaagtgctttatccatagggtccttccatgcagctgccaatggtgtagtggtagtgggttctgcaggaaactcaggaccccttcctagtaccgtgtccaataatgaaccgtgggtgatcacagttggagcaagcacaattgatagagactttgctagttatgttacacttggcaacaagaaaatcctcaagggagctagcctttcaatgtatgagttaccatctaagaagatgtacccgttgatcagtgctattgatgccaaaactaaaaatgcaaccgctctggatgccccgttttgtataaatggaactcttgatcctacgaaggtaaagggaaaaatattggtttgtcttcgtggtattaatggtagaattcagaagggtgaggtagctgctagtgcaggtgccattggaatgattttggctaatgacaaggactcagggaatggaattctatctgatctccatgcgcttcctgcatcacacgttgacttttcaagtgctacttacatttataattacatcaaccacactaagtctccagtggcttacatttcgaaaacaaaaacactattaggtgtaaagccagctccaattatggcttcattttcatcaaggggccctaatcttcttgagccaggaatcctcaagcctgatgtcaccgcaccaggagtcaacatcattgctgcatttagtgaattcatgtctcccacaattaatgaatctaaaaaacaaagaaatccatatgttgctatgtctggaacttcaatgtcatgccctcaagttgctggccttgctgggctactaaaagcactccatcctgattggagtccagctgctatcaagtcagcaatcattacctcggcaactgtaaaagataactctaaaaggctaatccaggattcatcatcaatgaacaagtcaactccatttgattatggtggggggcacattcgacctaatcatgctatggaccctggacttgtgtatgacctaaatactagtgattatttgaactttttgtgtgatcgtggttacactagttcccaactaaagttgttctacgacaagccttacacttgtccaaagtcattaaatttagcagatttcaattatccaacaatcacaattactaaatttggctctggtcaatctatcaatgtttctcgaatagtcactaatgttggggccccaagcatatatagggtgagcattgaggcaccaccacaacttataatttcagttgagcctacgaaactaagtttcaaaaaaagaggtgaaaaaaaggagttcagagttacatttaccttgaagccacaaacgaatagcaccactgatattgtattcgggtggttgacatggattaatcacagccaccatgtcaagagtcctattgtagtttacattgaatga 1704 0.0 MKGIKIDPSMLSARDYEGHGSHTLSTAGGNFVRGANVSGFGEGTASGGSPKARVATYKVCWPTCNDADILAAIEHAISDGVDVLSLSLGSKNPPEYSQSALSIGSFHAAANGVVVVGSAGNSGPLPSTVSNNEPWVITVGASTIDRDFASYVTLGNKKILKGASLSMYELPSKKMYPLISAIDAKTKNATALDAPFCINGTLDPTKVKGKILVCLRGINGRIQKGEVAASAGAIGMILANDKDSGNGILSDLHALPASHVDFSSATYIYNYINHTKSPVAYISKTKTLLGVKPAPIMASFSSRGPNLLEPGILKPDVTAPGVNIIAAFSEFMSPTINESKKQRNPYVAMSGTSMSCPQVAGLAGLLKALHPDWSPAAIKSAIITSATVKDNSKRLIQDSSSMNKSTPFDYGGGHIRPNHAMDPGLVYDLNTSDYLNFLCDRGYTSSQLKLFYDKPYTCPKSLNLADFNYPTITITKFGSGQSINVSRIVTNVGAPSIYRVSIEAPPQLIISVEPTKLSFKKRGEKKEFRVTFTLKPQTNSTTDIVFGWLTWINHSHHVKSPIVVYIE 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01786 567 ProSitePatterns Serine proteases, subtilase family, serine active site. 351 361 IPR023828 -
Pste6g01786 567 ProSiteProfiles Serine proteases, subtilase domain profile. 1 421 - -
Pste6g01786 567 FunFam Subtilisin-like protease SBT1.5 438 567 - -
Pste6g01786 567 FunFam subtilisin-like protease SBT1.5 145 289 - -
Pste6g01786 567 Gene3D - 438 566 - -
Pste6g01786 567 Pfam PA domain 192 265 IPR003137 -
Pste6g01786 567 PRINTS Subtilisin serine protease family (S8) signature 15 28 IPR015500 -
Pste6g01786 567 PRINTS Subtilisin serine protease family (S8) signature 350 366 IPR015500 -
Pste6g01786 567 Pfam Fibronectin type-III domain 466 564 IPR041469 -
Pste6g01786 567 SUPERFAMILY Subtilisin-like 12 425 IPR036852 GO:0004252|GO:0006508
Pste6g01786 567 Gene3D - 145 289 - -
Pste6g01786 567 CDD PA_subtilisin_like 151 282 - -
Pste6g01786 567 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 11 564 IPR045051 -
Pste6g01786 567 SUPERFAMILY PA domain 204 273 IPR046450 -
Pste6g01786 567 Pfam Subtilase family 13 389 IPR000209 GO:0006508|GO:0008236
Pste6g01786 567 Gene3D Peptidase S8/S53 domain 9 434 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01786 Pste-Chr6 8133239 8136851 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01786 3 566 Subtilisin-like Serine Gene Family AT5G59810 55.614 0.0 599