Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01776 atggcgtccttgcagcaccccacagctttccttcaatccaatcacgtggtaatctcccgaaacagcctcagccacaaacccatcggcagcctctctcttcccttgacggccctgaagctgaaattggccgtgagccgccgctccaccggcgcctccggggccagaatgtcggcgactgctgcagccagttacgcctccgccctggccgacgtggccagcgcgaacaacaccctggacgcgaccaccgcggacatagagaaaatcgaggaaatattctcggacccggcggtgtcggaatacttcgcggatccaaccttggaagtggagaagaagcggaagttggtggacgagattgcggaatcatcggggttccaggcccacactagaaacttcctctacatcatagttgacgctcagaggatcgacctcataagcgagatcgccaaggagttcgagtccgtctataactctttgaccgacaccgagcttgcggtggtgacctccgtcgtgaagttggagtcccagcacttggcgcagatcgctaagcaggttcagaagctcaccggagccaacaacgtcaggattaagaccctccttgacccttctttggtcgccggtttcaccgtcaggtatggcaattccggctccaagttgattgatatgagcgtccggaagcagctcgaagatattgctactcagcttgagttgggtgatatcaaacttgccgtatga 732 0.0 MASLQHPTAFLQSNHVVISRNSLSHKPIGSLSLPLTALKLKLAVSRRSTGASGARMSATAAASYASALADVASANNTLDATTADIEKIEEIFSDPAVSEYFADPTLEVEKKRKLVDEIAESSGFQAHTRNFLYIIVDAQRIDLISEIAKEFESVYNSLTDTELAVVTSVVKLESQHLAQIAKQVQKLTGANNVRIKTLLDPSLVAGFTVRYGNSGSKLIDMSVRKQLEDIATQLELGDIKLAV 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01776 243 Coils Coil 71 91 - -
Pste6g01776 243 Hamap ATP synthase subunit delta [atpD]. 56 236 IPR000711 GO:0015986|GO:0046933
Pste6g01776 243 PRINTS ATP synthase delta subunit signature 129 140 IPR000711 GO:0015986|GO:0046933
Pste6g01776 243 PRINTS ATP synthase delta subunit signature 209 227 IPR000711 GO:0015986|GO:0046933
Pste6g01776 243 PRINTS ATP synthase delta subunit signature 191 206 IPR000711 GO:0015986|GO:0046933
Pste6g01776 243 PRINTS ATP synthase delta subunit signature 140 154 IPR000711 GO:0015986|GO:0046933
Pste6g01776 243 PRINTS ATP synthase delta subunit signature 60 79 IPR000711 GO:0015986|GO:0046933
Pste6g01776 243 ProSitePatterns ATP synthase delta (OSCP) subunit signature. 193 212 IPR020781 GO:0015986|GO:0016020|GO:0046933
Pste6g01776 243 PANTHER ATP SYNTHASE DELTA CHAIN 43 235 IPR000711 GO:0015986|GO:0046933
Pste6g01776 243 Pfam ATP synthase delta (OSCP) subunit 61 234 IPR000711 GO:0015986|GO:0046933
Pste6g01776 243 NCBIfam ATP synthase F1 subunit delta 61 234 IPR000711 GO:0015986|GO:0046933
Pste6g01776 243 Gene3D - 60 153 IPR026015 -
Pste6g01776 243 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 57 159 IPR026015 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01776 50 242 Primary Pumps ATPases AT4G09650 68.912 1.31e-96 280