Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01757 ATGGAGCAACAACATAATAACAGAGCCCCCGAAGAAGCCGCGACCAGCACCGCCGCCACCCCCCGCGCCGGAGGAACACGCCACCCGCTCTTCCGGGGCGTCCGCAAGCGCCGCTGGGGCAAATGGGTCTCCGAAATCCGAGAGCCGCGCAAGAAGTCACGCATATGGCTCGGCTCCTTCCCGGCGCCGGAGATGGCCGCCAAGGCCTACGACGTCGCCGCCTACTGCCTCAAGGGACGCAAGGCCCAGCTCAACTTTCCCGACGAGGTCCACCGCCTCCCGCCGCTCCCCTCCGCCTTCACCGCCCGCGACATCCAGGCCGCCGCCGCCAAGGCCGCCCACATGATGGCCCCCAATTCCGGTGATGACTCGCCGCAGAAGAGCAGCATTACCGACGACTGCGACGGCGACGACTTCTGGCGCGAGATTGAGCTGCCGGAGCTACTCAACGGCAAGTGGTCCTGGGCCTCCTCCGGCGACGCCACGCCGTGGCCGGAATCCGATATTCCGACGCAGCAACCCTTCACCACGGCGTGCTTGTAG 543 0.6722 MEQQHNNRAPEEAATSTAATPRAGGTRHPLFRGVRKRRWGKWVSEIREPRKKSRIWLGSFPAPEMAAKAYDVAAYCLKGRKAQLNFPDEVHRLPPLPSAFTARDIQAAAAKAAHMMAPNSGDDSPQKSSITDDCDGDDFWREIELPELLNGKWSWASSGDATPWPESDIPTQQPFTTACL 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01757 180 ProSiteProfiles AP2/ERF domain profile. 30 87 IPR001471 GO:0003700|GO:0006355
Pste6g01757 180 MobiDBLite consensus disorder prediction 155 180 - -
Pste6g01757 180 SUPERFAMILY DNA-binding domain 30 89 IPR016177 GO:0003677
Pste6g01757 180 Pfam AP2 domain 29 79 IPR001471 GO:0003700|GO:0006355
Pste6g01757 180 FunFam Ethylene-responsive transcription factor 2 29 88 - -
Pste6g01757 180 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 11 148 - -
Pste6g01757 180 MobiDBLite consensus disorder prediction 153 180 - -
Pste6g01757 180 MobiDBLite consensus disorder prediction 1 31 - -
Pste6g01757 180 PRINTS Ethylene responsive element binding protein signature 31 42 IPR001471 GO:0003700|GO:0006355
Pste6g01757 180 PRINTS Ethylene responsive element binding protein signature 69 89 IPR001471 GO:0003700|GO:0006355
Pste6g01757 180 Gene3D AP2/ERF domain 30 88 IPR036955 GO:0003700|GO:0006355
Pste6g01757 180 SMART rav1_2 30 93 IPR001471 GO:0003700|GO:0006355
Pste6g01757 180 MobiDBLite consensus disorder prediction 8 22 - -
Pste6g01757 180 MobiDBLite consensus disorder prediction 113 133 - -
Pste6g01757 180 CDD AP2 29 88 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01757 Pste-Chr6 7972311 7972853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01757 11 180 AP2-EREBP Transcription Factor Family AT1G01250 57.065 3.35e-52 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pste6g01757 AP2 7.2e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01757 6 7972311 7972853 Pste6g01757 6 7972311 7972853 ECH