Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01751 atggcgtcgacaaggtcaccaaaccgttcttccgaggaggccgccgatccgacgccgttcctcgccacttcctccgacgaatccacctcaggccgccgtctcctccgccgccccagcctccgcgaggcggcgcgcttcctgcgccaggccagcggtcgccgcctcatgcgcgagccgtccatggtggtccgggaggcggcggctgagcaactggaagagaggcagagcgactgggcctattcgaagcccgtcgtgatcttagacattctctggaacttcgccttcgtcgccgccgccgtcacggttttggttctcagtagcgatgagaatccgaacatgcctctcaggttgtggattgtgggctacgctctgcagtgcgttcttcacgtcgcgtgcgtctgcgtcgagtatcggcgccggcagctccgccgtgaacagcccaacgctgccgtcgccggcagcggggatttgagtacggctttgatggacggttctgcacactacgtgtcgttgccacagttcgaggacgacggaataagtatggcgaagcatttggaatcggccaacacaatgttttcttttatttggtgggtagttggattctactgggtatcagctgatagtgaagctttgctccgagattctcctatgctttactggttatgtatagccttcctgggttttgatgttttctttgtcgttttctgtattgcactagcatgcatcattggtcttgctgtttgctgttgtcttccatgtatcattgcactcctgtatgcagttgcagaccaggaaggggcatcaaaagaagacatagagcagttagcaaaatttaaattccaaagaactgaaactaatgagaaacttgctgggaatacacaaggagctgctggaggaataatgattgaatgtgaggctgattctcccattgaacatgctcttccagatgaggatgcggaatgttgcatctgcctttctgcttatgatgacggggttgaacttagacaactcccttgtggtcatcatttccactgcgcttgtgtcgacaaatggctgtatatcaatgctacctgccccctctgcaagtacaacatcttgaaaagtaccagtaatgctcaagatgaagtgtag 1131 0.0 MASTRSPNRSSEEAADPTPFLATSSDESTSGRRLLRRPSLREAARFLRQASGRRLMREPSMVVREAAAEQLEERQSDWAYSKPVVILDILWNFAFVAAAVTVLVLSSDENPNMPLRLWIVGYALQCVLHVACVCVEYRRRQLRREQPNAAVAGSGDLSTALMDGSAHYVSLPQFEDDGISMAKHLESANTMFSFIWWVVGFYWVSADSEALLRDSPMLYWLCIAFLGFDVFFVVFCIALACIIGLAVCCCLPCIIALLYAVADQEGASKEDIEQLAKFKFQRTETNEKLAGNTQGAAGGIMIECEADSPIEHALPDEDAECCICLSAYDDGVELRQLPCGHHFHCACVDKWLYINATCPLCKYNILKSTSNAQDEV 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01751 376 CDD RING-H2_RNF6-like 320 362 - -
Pste6g01751 376 FunFam E3 ubiquitin-protein ligase At1g12760 307 372 - -
Pste6g01751 376 PANTHER TARGET OF ERK KINASE MPK-1 51 366 - -
Pste6g01751 376 MobiDBLite consensus disorder prediction 1 36 - -
Pste6g01751 376 SUPERFAMILY RING/U-box 313 370 - -
Pste6g01751 376 MobiDBLite consensus disorder prediction 1 29 - -
Pste6g01751 376 Pfam Ring finger domain 320 362 IPR001841 -
Pste6g01751 376 ProSiteProfiles Zinc finger RING-type profile. 321 362 IPR001841 -
Pste6g01751 376 SMART ring_2 321 361 IPR001841 -
Pste6g01751 376 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 305 369 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01751 Pste-Chr6 7913424 7918309 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01751 18 369 C3H Transcription Factor Family AT1G68070 48.459 3.85e-117 342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01751 6 7913424 7918309 Pste1g00400 1 1359006 1364282 PCT