Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01748 atgggaaaagcgtcaaagtggtttcgcggccttcttggtctgaaaaaaacagactacaccacttcacccgccaagccacataaagagaagcgccgctggaccttcgttaagtcatcacactcacacacagaaaaagacaaccacacgcagagagacaacaacaatcacgccatcgcagtagcagcagccactgctgccgtcgccgaagccgccgtcgccgctgccgaagccgctgccgtcgtcgtcagactaacaagcagcagcagcgccaggtgcgccgacgccggacccaccaggattcgccaacattgggctgccgttaagatccaagccgcttttcgtgcctgtctcgctagaagagcactgcgagcattaaaggggttggtgaagctgcaagcgttggtgagaggtcacattgagaggaagcggacagcggaatggctaaaaagagtgcaagcactcttgcatgcacaggcacaggtctcagcaaggttgaccctgcatgcctcaccttcgagtgcaaagttttctagtcacctccatggtccagaaacacccgaaaaatttgaaagccccgtccgatctaagagcatgaaatatgagcagtcacctatgctcaagagaattggctccaaatcatgcatccatatcaatggctatcaagagatatgtgggagtggaagtattagatcagagagtcaagtaaatgaacaatcatgtaactctggaagatcattgataagaacttacagctccaatgatgaaagaaacgacagggttcttgaaattgattctggaaaaccgaacttcacactaaagcgtagaaacctctcttactcaacaggctgtgatcactacagtaagagtttgaacagcctgaaggagtcaacatctcttcaatctggtcaaagtccaagttgtgaagttcaatcttacagctattgctcacaaaaagtcaacgaggttgaggacagtccattctgcactgctgataatagtccacaatttttatctgccaattctaaagatgatggcttcaaaagaagcccttttactccaactaggagtgatggctctagaagctacattcgcggttaccctgatcacccaagttacatggcatgcaccgagtcttcaaaggcaaaggtcagatctctgagtgccccaaaacagaggccacaaagtgagaggtctggttcatctaatagatactcactcaatggatttgatatgtccagattggccacacaaaggacaatgcatgcaagcttcaccaacaaagcatatcctggttctggtcgtttggacaagcttggtatgcctgtggggtacagatactga 1341 0.0 MGKASKWFRGLLGLKKTDYTTSPAKPHKEKRRWTFVKSSHSHTEKDNHTQRDNNNHAIAVAAATAAVAEAAVAAAEAAAVVVRLTSSSSARCADAGPTRIRQHWAAVKIQAAFRACLARRALRALKGLVKLQALVRGHIERKRTAEWLKRVQALLHAQAQVSARLTLHASPSSAKFSSHLHGPETPEKFESPVRSKSMKYEQSPMLKRIGSKSCIHINGYQEICGSGSIRSESQVNEQSCNSGRSLIRTYSSNDERNDRVLEIDSGKPNFTLKRRNLSYSTGCDHYSKSLNSLKESTSLQSGQSPSCEVQSYSYCSQKVNEVEDSPFCTADNSPQFLSANSKDDGFKRSPFTPTRSDGSRSYIRGYPDHPSYMACTESSKAKVRSLSAPKQRPQSERSGSSNRYSLNGFDMSRLATQRTMHASFTNKAYPGSGRLDKLGMPVGYRY 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01748 446 Gene3D - 99 155 - -
Pste6g01748 446 MobiDBLite consensus disorder prediction 380 407 - -
Pste6g01748 446 Pfam IQ calmodulin-binding motif 103 123 IPR000048 GO:0005515
Pste6g01748 446 Pfam IQ calmodulin-binding motif 129 143 IPR000048 GO:0005515
Pste6g01748 446 PANTHER IQ-DOMAIN 5-RELATED 1 407 - -
Pste6g01748 446 MobiDBLite consensus disorder prediction 181 195 - -
Pste6g01748 446 ProSiteProfiles IQ motif profile. 126 153 IPR000048 GO:0005515
Pste6g01748 446 MobiDBLite consensus disorder prediction 339 362 - -
Pste6g01748 446 MobiDBLite consensus disorder prediction 19 53 - -
Pste6g01748 446 Pfam Protein of unknown function (DUF4005) 333 409 IPR025064 -
Pste6g01748 446 MobiDBLite consensus disorder prediction 339 359 - -
Pste6g01748 446 ProSiteProfiles IQ motif profile. 102 130 IPR000048 GO:0005515
Pste6g01748 446 MobiDBLite consensus disorder prediction 36 52 - -
Pste6g01748 446 MobiDBLite consensus disorder prediction 174 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01748 Pste-Chr6 7895094 7898800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01748 1 446 IQD Protein Family AT4G23060 40.189 4.78e-63 209
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g01748 6 7895094 7898800 Pste1g02092 1 6575346 6577880 PCT