Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g01746 AGAGAGAGAGAGAGAGAGAGAGAGCACTGAAGAGGAGAGTACATTGTGATACGAGGAAGCAACGTTGGCAAGTTGGTAACGTGGATTGAAGTCTTTTGGGGGAAACAATCAGAGACAACGACAGCATCAAAAGGAAGGGAAAGACCCAGAACGGGAACGGCTTTCAGAAACTCACAAGCTTTTCAAAAAGCGGTTTTGGAGCTTCAAAGTGAAGGAAAAAAGTGCCCTTTGATTCTTGGTCACCGCAACGCCAAGACAAAGAAACAAAGCAAAACCAAAATAGCAACAAAAATAAAGCAAGCAAGAGGAGGCACCACACGATCCTTTCTGTAACCGAAACTTGAAGCAGCCACTCCTTGTATTATAATTTGGGGGAGTTGTTGGTGGTTAGAGAAGAGGAAGAGAAAGAGAAAGAAAATAAAGCAAGCAGTTTTTAGTTTGTAATTATTATTACTACTACTGCACACATTTAACTGTCATGTCTGGTTGGTGGTGAGGGAGCTTTCAATTGTCTTGGTTTTGTCTTTCTGTTGTGTGTGGTTTTGGTGTTGGTTTTGAATGGCACATCTGGAGTGTAATCTGGGGGCCCCTGGGAGTGGTAGTTTTCAACCGGAAAAAGGTCAATGAGTTTGTTGTGGTTGGAATTTCGTGTTGGATTACCTTGTTTGGTCACTGAGAAAGTTGAGACACAAAAAGGAAATGCTTGTGTTTTTTTAGCAATTGCTCATGTTTTTGTTTTTTAATGATGAAATTTGAGAGGTGAGTGAATGGCCCTTTTCTTTTGTGAAGATGGGGGAAAGTCGGGTGGAGAAAAGTTGTTAACTTTCTCAGAGACCATGCAGGGGCATTGAGCTTGTGTTCTTGTTCTTACTTGTTTCTGTTGTTGTGGCAGGTTTGAAGGATGATGATCTGTATAGAGAGCTATGGAAGTTGTGTGCAGGGCCTTTGGTGGATGTTCCTCGCACTGGGGACAGAGTTTTCTACTTCCCTCAGGGTCACATGGAACAATTGCAAGCATCTACGGATCAGGAATTGAACCAGGAAATTCCCCATTTCAATCTCCCGCCCAAGATTTTTTGCCGTGTTGTGAACATTCAGTTGTTGGCGGAACAAGACACCGATGAGGTTTATGCTTGCATCGCTTTGCTTCCAGAATCAGATCAAACTGAGCCTACAAATCCTGATCCAAATCTTTCTGAAGCCCCAAAACAAAACTTTCACTCGTTTTGCAAGATATTGACCGCCTCTGATACTAGCACACATGGAGGATTTTCAGTTTTGCGGAAGCATGCTACTGAGTGCTTGCCTCCATTGGACATGAATCAAGCAATCCCTACTCAGGAGTTGGCAGCAAAGGATCTTCATGGATTTGAGTGGAAATTTAAGCACATATATAGGGGTCAACCAAGGAGACACTTGCTTACAACTGGATGGAGTACATTTGTTGCATCTAAAAGATTGGTTGCTGGTGATGCCTTTGTATTTCTGAGGTATTCTAATTTGAATTTTGATGCCTTGCATAATTTCCTGTTTTTCATTTTGGGCCTCACTGAGGTTGATTGTTGCAGGGGAGAGCATGGACAATTGAGAGTTGGTGTTAGGCGTTTAGCACGGCAGCAGAGTCCTATGCCTTCTTCTGTGATATCAAGCCAGAGCATGCACCTTGGAGTGCTTGCTACTGCTTCTCATGCTGTTATGACTCGTACAATGTTTTTGGTTTATTACAAGCCAAGGACTAGCCAGTTTATTGTTGGTTTGAACAAATATCTGGAGGCAGTCAACAATAAATTTTCACTTGGCATGCGGTTCAAGATGCGATTTGAGGGAGATGACTCACCTGAGAGAAGGTTTTCAGGTACTATTGTTGGGGTTGGGGACGTGTCAGCAGGGTGGTCAAATTCTCAGTGGCGATCATTGAAGGTTCAATGGGATGAACCAGCTACAATTCTAAGACCGGATAGAGTTTCTTGCTGGGAGATAGAGCCTTTTGTAGCTTCTAATGCTTTAAATGTCACTCAACCAGCAGTGAAAGGCAAAAGGTCTAGGCCCGCTGATGTTTCATCTTCTGCTGCTTCTGGTTTCTGGTACCATGGTTCCTCCCAGTCTCATGAGCTTACTCCATTAGGTGCTGCTACTGTTGAGGTTCAAAGCAAGGAAAATCAGGTGGCATGCTCTCTGAGGCAGAAGGACCCTATTAATAGCAATCCTATTAATGCTAACTCTAGCAGCAGCTCTAGAGTCCGGGTGGAAGGAGTGTGGCCTTCTTCACCACATTTAAATGCCACTCCTAACCCTTTCTCTGATCCCAACAATAGCAATGGTGTTTTGGCACGATCATCGATCCATAGTTATCCTAATGTTCCATCTAGGTCAAGTGATGGTCCCACATGTGATCGTGTGGAAGATGGGAAAAAGACTGAGAATTCCCTTGATTGCTGGTTATTTGGAGTTAATTTGACCAACAATGCAAGCAATGGTATTACTCCTTCAGAGAGAGGTCCAAGCTCAAATGTTGTTTCTAGTGGTCCCAAAGAATCTATTCCTGTATTTGCATGTGAAACTGAGAGGGTTCAGACTTCCAACTATTCACTGTCCAACAAGGGGCAGAAGCAAATTATTTCTGAGGCATCACCAAATGAGTGGCAGAACAAGCAGGCCACTGTACCATCAATGAGGACGCGGACTAAGTTGAGGGTGAGAGATGCTAACTTTAATATATTTGAGAAGGTGCAAATGCAAGGTGTTGCTGTTGGTCGTGCATTTGACTTGACCACGTTGAGTGGCTATGATGATCTCATAGATGAACTTGAGAAATTGTTTGATATCAGAGGAGAGCTGCGTTCACAAGACAAATGGGCAGTTACTTTCACAGACGATGAAAATGACATGATGCTTGTGGGTGATGATCCATGGCCGGAGTTCTGCAACATGGTGAAGAGGATTTTCATTTGTTCAAGGGAGGAGTTGAAGAAGATGAAATGCTGCAAGCTACCTGCTTCTTCATCAGAAGTTGAAGAGACTCTATTGAGTCCAGATTCACAGACTAGGGATGAGACTCAACAGTCTCACATGCCTTAGACGACAACTTAGTTTTTTAACTTTTTCTGGGGTTGGGAAGGAATTGGTATCTGATGGCACGGGTTGCTTAATTTTAAGGAACTTTCACAGCAACTGCAGATTAGTGGACTAGTTTAAGTGGACCTATTATATATATTATATATAATATGAAAACCATAGGTAGTGCAGTTGGATTTTAGGTACTTATATTTGTGAATACTTTTTTTTCTTTCTACAGTGCCATCAGCATGTAAACAAGTATGCTTTTCCCATCTCTAATGGATTGTTTGTCTGTGACGTGTCGGTTTGTTCTACAGATATATTTTCTCG 3387 0.4263 MEQLQASTDQELNQEIPHFNLPPKIFCRVVNIQLLAEQDTDEVYACIALLPESDQTEPTNPDPNLSEAPKQNFHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMNQAIPTQELAAKDLHGFEWKFKHIYRGQPRRHLLTTGWSTFVASKRLVAGDAFVFLRYSNLNFDALHNFLFFILGLTEVDCCRGEHGQLRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVMTRTMFLVYYKPRTSQFIVGLNKYLEAVNNKFSLGMRFKMRFEGDDSPERRFSGTIVGVGDVSAGWSNSQWRSLKVQWDEPATILRPDRVSCWEIEPFVASNALNVTQPAVKGKRSRPADVSSSAASGFWYHGSSQSHELTPLGAATVEVQSKENQVACSLRQKDPINSNPINANSSSSSRVRVEGVWPSSPHLNATPNPFSDPNNSNGVLARSSIHSYPNVPSRSSDGPTCDRVEDGKKTENSLDCWLFGVNLTNNASNGITPSERGPSSNVVSSGPKESIPVFACETERVQTSNYSLSNKGQKQIISEASPNEWQNKQATVPSMRTRTKLRVRDANFNIFEKVQMQGVAVGRAFDLTTLSGYDDLIDELEKLFDIRGELRSQDKWAVTFTDDENDMMLVGDDPWPEFCNMVKRIFICSREELKKMKCCKLPASSSEVEETLLSPDSQTRDETQQSHMP 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g01746 692 SMART B3_2 76 180 IPR003340 GO:0003677
Pste6g01746 692 SUPERFAMILY CAD & PB1 domains 570 648 - -
Pste6g01746 692 MobiDBLite consensus disorder prediction 670 692 - -
Pste6g01746 692 Pfam B3 DNA binding domain 76 166 IPR003340 GO:0003677
Pste6g01746 692 Gene3D - 263 335 - -
Pste6g01746 692 Gene3D - 73 203 IPR015300 -
Pste6g01746 692 FunFam Auxin response factor 74 172 - -
Pste6g01746 692 MobiDBLite consensus disorder prediction 392 413 - -
Pste6g01746 692 ProSiteProfiles PB1 domain profile. 572 653 IPR000270 GO:0005515
Pste6g01746 692 MobiDBLite consensus disorder prediction 450 470 - -
Pste6g01746 692 MobiDBLite consensus disorder prediction 666 692 - -
Pste6g01746 692 ProSiteProfiles B3 DNA-binding domain profile. 76 184 IPR003340 GO:0003677
Pste6g01746 692 CDD B3_DNA 74 162 IPR003340 GO:0003677
Pste6g01746 692 Pfam Auxin response factor 228 307 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pste6g01746 692 Gene3D - 568 660 - -
Pste6g01746 692 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 660 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pste6g01746 692 FunFam Auxin response factor 263 334 - -
Pste6g01746 692 SUPERFAMILY DNA-binding pseudobarrel domain 64 230 IPR015300 -
Pste6g01746 692 Pfam AUX/IAA family 563 608 IPR033389 -
Pste6g01746 692 Pfam AUX/IAA family 615 655 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g01746 Pste-Chr6 7871520 7876532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g01746 1 659 B3 DNA Binding Superfamily AT4G23980 51.360 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Pste6g01746 B3 4.5e-19 CL0405